RNA–Protein interactions for RNA: ENST00000567198.1

NPTN-210, Transcript of neuroplastin, humanhuman

TSL 4

Gene NPTN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-210ENST00000567198 NISCHQ9Y2I1 1504 aa34.47■■■■□ 3.11
NPTN-210ENST00000567198 ABCC9O60706 1549 aa31.8■■■□□ 2.68
NPTN-210ENST00000567198 CCDC180Q9P1Z9 1646 aa31.07■■■□□ 2.56
NPTN-210ENST00000567198 DNAJC5BQ9UF47 199 aa30.38■■■□□ 2.45
NPTN-210ENST00000567198 RB1CC1Q8TDY2 1594 aa29.88■■■□□ 2.37
NPTN-210ENST00000567198 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.33
NPTN-210ENST00000567198 NACADO15069 1562 aa29.52■■■□□ 2.32
NPTN-210ENST00000567198 DCAF8L2P0C7V8 631 aa29.48■■■□□ 2.31
NPTN-210ENST00000567198 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
NPTN-210ENST00000567198 BICRAQ9NZM4 1560 aa29.11■■■□□ 2.25
NPTN-210ENST00000567198 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
NPTN-210ENST00000567198 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.17
NPTN-210ENST00000567198 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
NPTN-210ENST00000567198 SHROOM4Q9ULL8 1493 aa28.47■■■□□ 2.15
NPTN-210ENST00000567198 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
NPTN-210ENST00000567198 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
NPTN-210ENST00000567198 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
NPTN-210ENST00000567198 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
NPTN-210ENST00000567198 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
NPTN-210ENST00000567198 CUX2O14529 1486 aa27.48■■□□□ 1.99
NPTN-210ENST00000567198 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
NPTN-210ENST00000567198 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
NPTN-210ENST00000567198 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
NPTN-210ENST00000567198 NESP48681 1621 aa27.18■■□□□ 1.94
NPTN-210ENST00000567198 HMGXB3Q12766 1538 aa27.01■■□□□ 1.91
NPTN-210ENST00000567198 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
NPTN-210ENST00000567198 SMARCA4P51532 1647 aa27■■□□□ 1.91
NPTN-210ENST00000567198 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
NPTN-210ENST00000567198 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
NPTN-210ENST00000567198 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
NPTN-210ENST00000567198 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
NPTN-210ENST00000567198 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
NPTN-210ENST00000567198 LAMC3Q9Y6N6 1575 aa26.74■■□□□ 1.87
NPTN-210ENST00000567198 PEG3Q9GZU2 1588 aa26.68■■□□□ 1.86
NPTN-210ENST00000567198 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
NPTN-210ENST00000567198 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
NPTN-210ENST00000567198 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
NPTN-210ENST00000567198 MRC2Q9UBG0 1479 aa26.46■■□□□ 1.83
NPTN-210ENST00000567198 WDR62O43379 1518 aa26.39■■□□□ 1.82
NPTN-210ENST00000567198 WIZO95785 1651 aa26.28■■□□□ 1.8
NPTN-210ENST00000567198 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
NPTN-210ENST00000567198 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
NPTN-210ENST00000567198 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
NPTN-210ENST00000567198 CFTRP13569 1480 aa26.04■■□□□ 1.76
NPTN-210ENST00000567198 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
NPTN-210ENST00000567198 RIMBP3CA6NJZ7 1639 aa25.95■■□□□ 1.74
NPTN-210ENST00000567198 RIMBP3BA6NNM3 1639 aa25.95■■□□□ 1.74
NPTN-210ENST00000567198 RIMBP3Q9UFD9 1639 aa25.95■■□□□ 1.74
NPTN-210ENST00000567198 ZNF608Q9ULD9 1512 aaPredicted RBP25.85■■□□□ 1.73
NPTN-210ENST00000567198 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
NPTN-210ENST00000567198 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.72
NPTN-210ENST00000567198 ARHGEF11O15085 1522 aa25.8■■□□□ 1.72
NPTN-210ENST00000567198 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
NPTN-210ENST00000567198 CYB5RLQ6IPT4 315 aa25.71■■□□□ 1.71
NPTN-210ENST00000567198 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
NPTN-210ENST00000567198 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
NPTN-210ENST00000567198 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
NPTN-210ENST00000567198 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
NPTN-210ENST00000567198 TRHP20396 242 aaPredicted RBP25.6■■□□□ 1.69
NPTN-210ENST00000567198 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.68
NPTN-210ENST00000567198 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
NPTN-210ENST00000567198 CHD1O14646 1710 aa25.53■■□□□ 1.68
NPTN-210ENST00000567198 FBLN2P98095 1184 aa25.51■■□□□ 1.67
NPTN-210ENST00000567198 DNMBPQ6XZF7 1577 aa25.46■■□□□ 1.67
NPTN-210ENST00000567198 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
NPTN-210ENST00000567198 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
NPTN-210ENST00000567198 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
NPTN-210ENST00000567198 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
NPTN-210ENST00000567198 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
NPTN-210ENST00000567198 SNAPC4Q5SXM2 1469 aa25.23■■□□□ 1.63
NPTN-210ENST00000567198 SOGA1O94964 1423 aa25.22■■□□□ 1.63
NPTN-210ENST00000567198 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
NPTN-210ENST00000567198 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
NPTN-210ENST00000567198 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
NPTN-210ENST00000567198 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
NPTN-210ENST00000567198 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
NPTN-210ENST00000567198 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
NPTN-210ENST00000567198 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
NPTN-210ENST00000567198 CUX1P39880 1505 aa25.02■■□□□ 1.6
NPTN-210ENST00000567198 SYNJ2O15056 1496 aa25.01■■□□□ 1.59
NPTN-210ENST00000567198 WDR97A6NE52 1622 aa25■■□□□ 1.59
NPTN-210ENST00000567198 GAPVD1Q14C86 1478 aa24.99■■□□□ 1.59
NPTN-210ENST00000567198 PBRM1Q86U86 1689 aa24.9■■□□□ 1.58
NPTN-210ENST00000567198 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
NPTN-210ENST00000567198 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
NPTN-210ENST00000567198 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
NPTN-210ENST00000567198 GRIN2AQ12879 1464 aa24.72■■□□□ 1.55
NPTN-210ENST00000567198 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
NPTN-210ENST00000567198 NUP160Q12769 1436 aa24.65■■□□□ 1.54
NPTN-210ENST00000567198 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
NPTN-210ENST00000567198 KIF13AQ9H1H9 1805 aa24.58■■□□□ 1.53
NPTN-210ENST00000567198 SHROOM2Q13796 1616 aa24.58■■□□□ 1.53
NPTN-210ENST00000567198 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
NPTN-210ENST00000567198 FHAD1B1AJZ9 1412 aa24.53■■□□□ 1.52
NPTN-210ENST00000567198 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
NPTN-210ENST00000567198 FAM69CQ0P6D2 419 aa24.46■■□□□ 1.51
NPTN-210ENST00000567198 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
NPTN-210ENST00000567198 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
NPTN-210ENST00000567198 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
NPTN-210ENST00000567198 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms