RNA–Protein interactions for RNA: ENST00000486782.1

ATP1B3-208, Transcript of ATPase Na+/K+ transporting subunit beta 3, humanhuman

TSL 2

Gene ATP1B3, Length 229 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3-208ENST00000486782 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
ATP1B3-208ENST00000486782 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
ATP1B3-208ENST00000486782 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
ATP1B3-208ENST00000486782 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
ATP1B3-208ENST00000486782 FOXD1Q16676 465 aa18.25■□□□□ 0.51
ATP1B3-208ENST00000486782 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
ATP1B3-208ENST00000486782 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
ATP1B3-208ENST00000486782 ADRA2BP18089 450 aa17.37■□□□□ 0.37
ATP1B3-208ENST00000486782 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
ATP1B3-208ENST00000486782 MSH5O43196 834 aa16.85■□□□□ 0.29
ATP1B3-208ENST00000486782 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
ATP1B3-208ENST00000486782 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
ATP1B3-208ENST00000486782 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
ATP1B3-208ENST00000486782 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
ATP1B3-208ENST00000486782 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
ATP1B3-208ENST00000486782 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
ATP1B3-208ENST00000486782 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
ATP1B3-208ENST00000486782 KCNA4P22459 653 aa15.35■□□□□ 0.05
ATP1B3-208ENST00000486782 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
ATP1B3-208ENST00000486782 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
ATP1B3-208ENST00000486782 NPM3O75607 178 aaKnown RBP15.24■□□□□ 0.03
ATP1B3-208ENST00000486782 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
ATP1B3-208ENST00000486782 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
ATP1B3-208ENST00000486782 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
ATP1B3-208ENST00000486782 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
ATP1B3-208ENST00000486782 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
ATP1B3-208ENST00000486782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.1
ATP1B3-208ENST00000486782 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
ATP1B3-208ENST00000486782 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
ATP1B3-208ENST00000486782 ZBTB22O15209 634 aa14.18□□□□□ -0.14
ATP1B3-208ENST00000486782 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
ATP1B3-208ENST00000486782 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
ATP1B3-208ENST00000486782 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
ATP1B3-208ENST00000486782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
ATP1B3-208ENST00000486782 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
ATP1B3-208ENST00000486782 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
ATP1B3-208ENST00000486782 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
ATP1B3-208ENST00000486782 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
ATP1B3-208ENST00000486782 EHMT2Q96KQ7 1210 aa13.87□□□□□ -0.19
ATP1B3-208ENST00000486782 APLP2Q06481 763 aa13.83□□□□□ -0.2
ATP1B3-208ENST00000486782 CAPN15O75808 1086 aa13.78□□□□□ -0.2
ATP1B3-208ENST00000486782 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
ATP1B3-208ENST00000486782 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
ATP1B3-208ENST00000486782 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
ATP1B3-208ENST00000486782 DSG3P32926 999 aa13.7□□□□□ -0.22
ATP1B3-208ENST00000486782 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
ATP1B3-208ENST00000486782 ABCB7O75027 752 aa13.53□□□□□ -0.24
ATP1B3-208ENST00000486782 POLA2Q14181 598 aa13.46□□□□□ -0.25
ATP1B3-208ENST00000486782 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
ATP1B3-208ENST00000486782 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
ATP1B3-208ENST00000486782 FBLN2P98095 1184 aa13.06□□□□□ -0.32
ATP1B3-208ENST00000486782 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
ATP1B3-208ENST00000486782 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
ATP1B3-208ENST00000486782 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
ATP1B3-208ENST00000486782 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
ATP1B3-208ENST00000486782 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
ATP1B3-208ENST00000486782 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
ATP1B3-208ENST00000486782 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
ATP1B3-208ENST00000486782 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
ATP1B3-208ENST00000486782 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
ATP1B3-208ENST00000486782 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
ATP1B3-208ENST00000486782 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATP1B3-208ENST00000486782 PROM2Q8N271 834 aa12.59□□□□□ -0.39
ATP1B3-208ENST00000486782 PITPNM1O00562 1244 aa12.57□□□□□ -0.4
ATP1B3-208ENST00000486782 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
ATP1B3-208ENST00000486782 FKBP8Q14318 412 aa12.51□□□□□ -0.41
ATP1B3-208ENST00000486782 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
ATP1B3-208ENST00000486782 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
ATP1B3-208ENST00000486782 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
ATP1B3-208ENST00000486782 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
ATP1B3-208ENST00000486782 POTEHQ6S545 545 aa12.35□□□□□ -0.43
ATP1B3-208ENST00000486782 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
ATP1B3-208ENST00000486782 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
ATP1B3-208ENST00000486782 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.45
ATP1B3-208ENST00000486782 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
ATP1B3-208ENST00000486782 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
ATP1B3-208ENST00000486782 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
ATP1B3-208ENST00000486782 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
ATP1B3-208ENST00000486782 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
ATP1B3-208ENST00000486782 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
ATP1B3-208ENST00000486782 VASPP50552 380 aaPredicted RBP11.99□□□□□ -0.49
ATP1B3-208ENST00000486782 MIER1Q8N108 512 aa11.99□□□□□ -0.49
ATP1B3-208ENST00000486782 EVX2Q03828 476 aa11.94□□□□□ -0.5
ATP1B3-208ENST00000486782 HAX1O00165 279 aa11.93□□□□□ -0.5
ATP1B3-208ENST00000486782 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
ATP1B3-208ENST00000486782 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
ATP1B3-208ENST00000486782 NPM1P06748 294 aaKnown RBP eCLIP11.89□□□□□ -0.51
ATP1B3-208ENST00000486782 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
ATP1B3-208ENST00000486782 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
ATP1B3-208ENST00000486782 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
ATP1B3-208ENST00000486782 NUBP1P53384 320 aa11.82□□□□□ -0.52
ATP1B3-208ENST00000486782 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
ATP1B3-208ENST00000486782 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
ATP1B3-208ENST00000486782 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
ATP1B3-208ENST00000486782 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
ATP1B3-208ENST00000486782 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
ATP1B3-208ENST00000486782 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
ATP1B3-208ENST00000486782 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
ATP1B3-208ENST00000486782 TSPYL2Q9H2G4 693 aaPredicted RBP11.68□□□□□ -0.54
ATP1B3-208ENST00000486782 SPOCK2Q92563 424 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms