RNA–Protein interactions for RNA: ENST00000528477.1

SLC19A1-211, Transcript of solute carrier family 19 member 1, humanhuman

TSL 4

Gene SLC19A1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-211ENST00000528477 NISCHQ9Y2I1 1504 aa38.72■■■■□ 3.79
SLC19A1-211ENST00000528477 ABCC9O60706 1549 aa35.28■■■■□ 3.24
SLC19A1-211ENST00000528477 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
SLC19A1-211ENST00000528477 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
SLC19A1-211ENST00000528477 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
SLC19A1-211ENST00000528477 NACADO15069 1562 aa33.04■■■□□ 2.88
SLC19A1-211ENST00000528477 DCAF8L2P0C7V8 631 aa32.83■■■□□ 2.85
SLC19A1-211ENST00000528477 PABPN1Q86U42 306 aaKnown RBP eCLIP32.83■■■□□ 2.85
SLC19A1-211ENST00000528477 UNC13AQ9UPW8 1703 aa32.64■■■□□ 2.82
SLC19A1-211ENST00000528477 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
SLC19A1-211ENST00000528477 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
SLC19A1-211ENST00000528477 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
SLC19A1-211ENST00000528477 DCAF1Q9Y4B6 1507 aa31.93■■■□□ 2.7
SLC19A1-211ENST00000528477 SHROOM4Q9ULL8 1493 aa31.88■■■□□ 2.69
SLC19A1-211ENST00000528477 CC2D2AQ9P2K1 1620 aa31.83■■■□□ 2.69
SLC19A1-211ENST00000528477 CECR2Q9BXF3 1484 aa31.8■■■□□ 2.68
SLC19A1-211ENST00000528477 SCRIBQ14160 1630 aa31.76■■■□□ 2.67
SLC19A1-211ENST00000528477 EIF4G1Q04637 1599 aaKnown RBP31.67■■■□□ 2.66
SLC19A1-211ENST00000528477 DNAJC5Q9H3Z4 198 aa31■■■□□ 2.55
SLC19A1-211ENST00000528477 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
SLC19A1-211ENST00000528477 CUX2O14529 1486 aa30.5■■■□□ 2.47
SLC19A1-211ENST00000528477 ATAD2BQ9ULI0 1458 aa30.42■■■□□ 2.46
SLC19A1-211ENST00000528477 ERCC6Q03468 1493 aa30.41■■■□□ 2.46
SLC19A1-211ENST00000528477 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
SLC19A1-211ENST00000528477 HMGXB3Q12766 1538 aa30.25■■■□□ 2.43
SLC19A1-211ENST00000528477 NESP48681 1621 aa30.24■■■□□ 2.43
SLC19A1-211ENST00000528477 SMARCA2P51531 1590 aa30.24■■■□□ 2.43
SLC19A1-211ENST00000528477 BAZ1BQ9UIG0 1483 aaKnown RBP30.05■■■□□ 2.4
SLC19A1-211ENST00000528477 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
SLC19A1-211ENST00000528477 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
SLC19A1-211ENST00000528477 THOC2Q8NI27 1593 aaKnown RBP29.95■■■□□ 2.39
SLC19A1-211ENST00000528477 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
SLC19A1-211ENST00000528477 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
SLC19A1-211ENST00000528477 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.36
SLC19A1-211ENST00000528477 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
SLC19A1-211ENST00000528477 CADPSQ9ULU8 1353 aa29.61■■■□□ 2.33
SLC19A1-211ENST00000528477 MRC2Q9UBG0 1479 aa29.49■■■□□ 2.31
SLC19A1-211ENST00000528477 WIZO95785 1651 aa29.47■■■□□ 2.31
SLC19A1-211ENST00000528477 TRIM41Q8WV44 630 aa29.45■■■□□ 2.31
SLC19A1-211ENST00000528477 WDR62O43379 1518 aa29.45■■■□□ 2.3
SLC19A1-211ENST00000528477 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
SLC19A1-211ENST00000528477 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
SLC19A1-211ENST00000528477 CFTRP13569 1480 aa29.19■■■□□ 2.26
SLC19A1-211ENST00000528477 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
SLC19A1-211ENST00000528477 OSCARQ8IYS5 282 aa29.08■■■□□ 2.25
SLC19A1-211ENST00000528477 URB2Q14146 1524 aaKnown RBP29.08■■■□□ 2.25
SLC19A1-211ENST00000528477 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
SLC19A1-211ENST00000528477 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
SLC19A1-211ENST00000528477 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
SLC19A1-211ENST00000528477 CCDC88BA6NC98 1476 aa28.76■■■□□ 2.19
SLC19A1-211ENST00000528477 RIMBP3CA6NJZ7 1639 aa28.74■■■□□ 2.19
SLC19A1-211ENST00000528477 RIMBP3BA6NNM3 1639 aa28.74■■■□□ 2.19
SLC19A1-211ENST00000528477 RIMBP3Q9UFD9 1639 aa28.74■■■□□ 2.19
SLC19A1-211ENST00000528477 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
SLC19A1-211ENST00000528477 TOPBP1Q92547 1522 aa28.67■■■□□ 2.18
SLC19A1-211ENST00000528477 ARHGEF11O15085 1522 aa28.62■■■□□ 2.17
SLC19A1-211ENST00000528477 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
SLC19A1-211ENST00000528477 ABCC8Q09428 1581 aa28.51■■■□□ 2.15
SLC19A1-211ENST00000528477 DNMBPQ6XZF7 1577 aa28.5■■■□□ 2.15
SLC19A1-211ENST00000528477 AQRO60306 1485 aaKnown RBP eCLIP28.47■■■□□ 2.15
SLC19A1-211ENST00000528477 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
SLC19A1-211ENST00000528477 TARBP1Q13395 1621 aaKnown RBP28.46■■■□□ 2.15
SLC19A1-211ENST00000528477 CHD1O14646 1710 aa28.4■■■□□ 2.14
SLC19A1-211ENST00000528477 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
SLC19A1-211ENST00000528477 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
SLC19A1-211ENST00000528477 FBLN2P98095 1184 aa28.31■■■□□ 2.12
SLC19A1-211ENST00000528477 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
SLC19A1-211ENST00000528477 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
SLC19A1-211ENST00000528477 SOGA1O94964 1423 aa28.22■■■□□ 2.11
SLC19A1-211ENST00000528477 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
SLC19A1-211ENST00000528477 SNAPC4Q5SXM2 1469 aa28.13■■■□□ 2.09
SLC19A1-211ENST00000528477 FGD5Q6ZNL6 1462 aa28.12■■■□□ 2.09
SLC19A1-211ENST00000528477 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
SLC19A1-211ENST00000528477 CUX1P39880 1505 aa28.07■■■□□ 2.08
SLC19A1-211ENST00000528477 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
SLC19A1-211ENST00000528477 CHMP7Q8WUX9 453 aaPredicted RBP28.04■■■□□ 2.08
SLC19A1-211ENST00000528477 MAGI1Q96QZ7 1491 aaPredicted RBP28.01■■■□□ 2.07
SLC19A1-211ENST00000528477 GRIN2BQ13224 1484 aa27.99■■■□□ 2.07
SLC19A1-211ENST00000528477 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
SLC19A1-211ENST00000528477 SYNJ2O15056 1496 aa27.95■■■□□ 2.06
SLC19A1-211ENST00000528477 GAPVD1Q14C86 1478 aa27.86■■■□□ 2.05
SLC19A1-211ENST00000528477 PBRM1Q86U86 1689 aa27.83■■■□□ 2.05
SLC19A1-211ENST00000528477 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
SLC19A1-211ENST00000528477 ABCA5Q8WWZ7 1642 aa27.76■■■□□ 2.03
SLC19A1-211ENST00000528477 ERCC6L2Q5T890 1561 aa27.69■■■□□ 2.02
SLC19A1-211ENST00000528477 GRIN2AQ12879 1464 aa27.64■■■□□ 2.02
SLC19A1-211ENST00000528477 AEBP2Q6ZN18 517 aaPredicted RBP27.62■■■□□ 2.01
SLC19A1-211ENST00000528477 NUP160Q12769 1436 aa27.58■■■□□ 2.01
SLC19A1-211ENST00000528477 CEP170Q5SW79 1584 aa27.58■■■□□ 2.01
SLC19A1-211ENST00000528477 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2
SLC19A1-211ENST00000528477 ADAMTS12P58397 1594 aa27.56■■■□□ 2
SLC19A1-211ENST00000528477 SUPT5HO00267 1087 aaKnown RBP27.52■■■□□ 2
SLC19A1-211ENST00000528477 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
SLC19A1-211ENST00000528477 FHAD1B1AJZ9 1412 aa27.48■■□□□ 1.99
SLC19A1-211ENST00000528477 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
SLC19A1-211ENST00000528477 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
SLC19A1-211ENST00000528477 ERICH3Q5RHP9 1530 aa27.39■■□□□ 1.98
SLC19A1-211ENST00000528477 PRG4Q92954 1404 aaPredicted RBP27.34■■□□□ 1.97
SLC19A1-211ENST00000528477 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
SLC19A1-211ENST00000528477 JPH4Q96JJ6 628 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms