RNA–Protein interactions for RNA: ENST00000526558.1

PTDSS2-204, Transcript of phosphatidylserine synthase 2, humanhuman

TSL 3

Gene PTDSS2, Length 469 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS2-204ENST00000526558 NISCHQ9Y2I1 1504 aa47.89■■■■■ 5.26
PTDSS2-204ENST00000526558 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.45
PTDSS2-204ENST00000526558 ABCC9O60706 1549 aa42.37■■■■■ 4.37
PTDSS2-204ENST00000526558 RB1CC1Q8TDY2 1594 aa40.58■■■■■ 4.09
PTDSS2-204ENST00000526558 NACADO15069 1562 aa40.38■■■■■ 4.05
PTDSS2-204ENST00000526558 DCAF8L2P0C7V8 631 aa40.24■■■■■ 4.03
PTDSS2-204ENST00000526558 MYO15BQ96JP2 1530 aa39.93■■■■□ 3.98
PTDSS2-204ENST00000526558 ZCCHC6Q5VYS8 1495 aaKnown RBP39.8■■■■□ 3.96
PTDSS2-204ENST00000526558 UNC13AQ9UPW8 1703 aa39.7■■■■□ 3.95
PTDSS2-204ENST00000526558 DCAF1Q9Y4B6 1507 aa39.59■■■■□ 3.93
PTDSS2-204ENST00000526558 PABPN1Q86U42 306 aaKnown RBP eCLIP39.47■■■■□ 3.91
PTDSS2-204ENST00000526558 BICRAQ9NZM4 1560 aa39.31■■■■□ 3.88
PTDSS2-204ENST00000526558 DNAJC5BQ9UF47 199 aa39.21■■■■□ 3.87
PTDSS2-204ENST00000526558 SCRIBQ14160 1630 aa39.09■■■■□ 3.85
PTDSS2-204ENST00000526558 SHROOM4Q9ULL8 1493 aa38.88■■■■□ 3.81
PTDSS2-204ENST00000526558 EIF4G1Q04637 1599 aaKnown RBP38.35■■■■□ 3.73
PTDSS2-204ENST00000526558 CC2D2AQ9P2K1 1620 aa38.32■■■■□ 3.73
PTDSS2-204ENST00000526558 CECR2Q9BXF3 1484 aa38.12■■■■□ 3.69
PTDSS2-204ENST00000526558 SMARCA4P51532 1647 aa37.32■■■■□ 3.56
PTDSS2-204ENST00000526558 NCAPD3P42695 1498 aa37.2■■■■□ 3.55
PTDSS2-204ENST00000526558 BAZ1AQ9NRL2 1556 aaPredicted RBP37.19■■■■□ 3.54
PTDSS2-204ENST00000526558 ATAD2BQ9ULI0 1458 aa37.17■■■■□ 3.54
PTDSS2-204ENST00000526558 SMARCA2P51531 1590 aa37.17■■■■□ 3.54
PTDSS2-204ENST00000526558 HMGXB3Q12766 1538 aa37.04■■■■□ 3.52
PTDSS2-204ENST00000526558 PEG3Q9GZU2 1588 aa36.91■■■■□ 3.5
PTDSS2-204ENST00000526558 BAZ1BQ9UIG0 1483 aaKnown RBP36.9■■■■□ 3.5
PTDSS2-204ENST00000526558 MROH2BQ7Z745 1585 aa36.9■■■■□ 3.5
PTDSS2-204ENST00000526558 ERCC6Q03468 1493 aa36.61■■■■□ 3.45
PTDSS2-204ENST00000526558 WIZO95785 1651 aa36.53■■■■□ 3.44
PTDSS2-204ENST00000526558 NESP48681 1621 aa36.51■■■■□ 3.43
PTDSS2-204ENST00000526558 LAMC3Q9Y6N6 1575 aa36.38■■■■□ 3.41
PTDSS2-204ENST00000526558 CUX2O14529 1486 aa36.35■■■■□ 3.41
PTDSS2-204ENST00000526558 RSF1Q96T23 1441 aaPredicted RBP36.27■■■■□ 3.4
PTDSS2-204ENST00000526558 KIF21AQ7Z4S6 1674 aa36.14■■■■□ 3.38
PTDSS2-204ENST00000526558 PDS5BQ9NTI5 1447 aa36.13■■■■□ 3.37
PTDSS2-204ENST00000526558 TOP2AP11388 1531 aaKnown RBP36.1■■■■□ 3.37
PTDSS2-204ENST00000526558 CADPSQ9ULU8 1353 aa36.1■■■■□ 3.37
PTDSS2-204ENST00000526558 THOC2Q8NI27 1593 aaKnown RBP36.1■■■■□ 3.37
PTDSS2-204ENST00000526558 CFTRP13569 1480 aa35.8■■■■□ 3.32
PTDSS2-204ENST00000526558 MRC2Q9UBG0 1479 aa35.8■■■■□ 3.32
PTDSS2-204ENST00000526558 CEP164Q9UPV0 1460 aa35.77■■■■□ 3.32
PTDSS2-204ENST00000526558 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
PTDSS2-204ENST00000526558 DNAJC5Q9H3Z4 198 aa35.73■■■■□ 3.31
PTDSS2-204ENST00000526558 WDR62O43379 1518 aa35.69■■■■□ 3.3
PTDSS2-204ENST00000526558 PRDM2Q13029 1718 aa35.64■■■■□ 3.3
PTDSS2-204ENST00000526558 CCDC88BA6NC98 1476 aa35.63■■■■□ 3.29
PTDSS2-204ENST00000526558 URB2Q14146 1524 aaKnown RBP35.39■■■■□ 3.26
PTDSS2-204ENST00000526558 TOPBP1Q92547 1522 aa35.11■■■■□ 3.21
PTDSS2-204ENST00000526558 ABCC8Q09428 1581 aa35.08■■■■□ 3.21
PTDSS2-204ENST00000526558 DNMBPQ6XZF7 1577 aa35.05■■■■□ 3.2
PTDSS2-204ENST00000526558 SUPT5HO00267 1087 aaKnown RBP35.03■■■■□ 3.2
PTDSS2-204ENST00000526558 IFT140Q96RY7 1462 aa35.01■■■■□ 3.19
PTDSS2-204ENST00000526558 ZNF608Q9ULD9 1512 aaPredicted RBP34.87■■■■□ 3.17
PTDSS2-204ENST00000526558 EIF4G3O43432 1585 aaKnown RBP34.79■■■■□ 3.16
PTDSS2-204ENST00000526558 TARBP1Q13395 1621 aaKnown RBP34.77■■■■□ 3.16
PTDSS2-204ENST00000526558 POLA1P09884 1462 aaPredicted RBP34.77■■■■□ 3.16
PTDSS2-204ENST00000526558 OSCARQ8IYS5 282 aa34.72■■■■□ 3.15
PTDSS2-204ENST00000526558 CUX1P39880 1505 aa34.65■■■■□ 3.14
PTDSS2-204ENST00000526558 FGD5Q6ZNL6 1462 aa34.63■■■■□ 3.13
PTDSS2-204ENST00000526558 RAD54L2Q9Y4B4 1467 aa34.62■■■■□ 3.13
PTDSS2-204ENST00000526558 AQRO60306 1485 aaKnown RBP eCLIP34.61■■■■□ 3.13
PTDSS2-204ENST00000526558 SOGA1O94964 1423 aa34.61■■■■□ 3.13
PTDSS2-204ENST00000526558 WDR97A6NE52 1622 aa34.5■■■■□ 3.11
PTDSS2-204ENST00000526558 CHD1O14646 1710 aa34.48■■■■□ 3.11
PTDSS2-204ENST00000526558 TDRD9Q8NDG6 1382 aaKnown RBP34.47■■■■□ 3.11
PTDSS2-204ENST00000526558 TRIM41Q8WV44 630 aa34.43■■■■□ 3.1
PTDSS2-204ENST00000526558 FBLN2P98095 1184 aa34.34■■■■□ 3.09
PTDSS2-204ENST00000526558 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
PTDSS2-204ENST00000526558 RIMBP3CA6NJZ7 1639 aa34.3■■■■□ 3.08
PTDSS2-204ENST00000526558 RIMBP3BA6NNM3 1639 aa34.3■■■■□ 3.08
PTDSS2-204ENST00000526558 RIMBP3Q9UFD9 1639 aa34.3■■■■□ 3.08
PTDSS2-204ENST00000526558 GRIN2BQ13224 1484 aa34.28■■■■□ 3.08
PTDSS2-204ENST00000526558 BIVM-ERCC5R4GMW8 1640 aa34.28■■■■□ 3.08
PTDSS2-204ENST00000526558 PBRM1Q86U86 1689 aa34.28■■■■□ 3.08
PTDSS2-204ENST00000526558 TOP2BQ02880 1626 aa34.26■■■■□ 3.08
PTDSS2-204ENST00000526558 WRNQ14191 1432 aaPredicted RBP eCLIP34.26■■■■□ 3.07
PTDSS2-204ENST00000526558 MAGI1Q96QZ7 1491 aaPredicted RBP34.26■■■■□ 3.07
PTDSS2-204ENST00000526558 ABCA10Q8WWZ4 1543 aa34.25■■■■□ 3.07
PTDSS2-204ENST00000526558 SYNJ1O43426 1573 aa34.23■■■■□ 3.07
PTDSS2-204ENST00000526558 GAPVD1Q14C86 1478 aa34.22■■■■□ 3.07
PTDSS2-204ENST00000526558 ARHGEF11O15085 1522 aa34.2■■■■□ 3.07
PTDSS2-204ENST00000526558 ABCA5Q8WWZ7 1642 aa34.2■■■■□ 3.07
PTDSS2-204ENST00000526558 CHMP7Q8WUX9 453 aaPredicted RBP34.14■■■■□ 3.06
PTDSS2-204ENST00000526558 SYNJ2O15056 1496 aa34.13■■■■□ 3.05
PTDSS2-204ENST00000526558 CLASP1Q7Z460 1538 aa34.02■■■■□ 3.04
PTDSS2-204ENST00000526558 ADAMTS12P58397 1594 aa33.92■■■■□ 3.02
PTDSS2-204ENST00000526558 CYB5RLQ6IPT4 315 aa33.88■■■■□ 3.01
PTDSS2-204ENST00000526558 ARAP1Q96P48 1450 aa33.88■■■■□ 3.01
PTDSS2-204ENST00000526558 ERICH3Q5RHP9 1530 aa33.85■■■■□ 3.01
PTDSS2-204ENST00000526558 GRIN2AQ12879 1464 aa33.85■■■■□ 3.01
PTDSS2-204ENST00000526558 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
PTDSS2-204ENST00000526558 CEP170Q5SW79 1584 aa33.72■■■□□ 2.99
PTDSS2-204ENST00000526558 NUP160Q12769 1436 aa33.68■■■□□ 2.98
PTDSS2-204ENST00000526558 KIF27Q86VH2 1401 aa33.59■■■□□ 2.97
PTDSS2-204ENST00000526558 SHROOM2Q13796 1616 aa33.53■■■□□ 2.96
PTDSS2-204ENST00000526558 CUL7Q14999 1698 aa33.52■■■□□ 2.96
PTDSS2-204ENST00000526558 ERCC6L2Q5T890 1561 aa33.5■■■□□ 2.95
PTDSS2-204ENST00000526558 IGF1RP08069 1367 aa33.44■■■□□ 2.94
PTDSS2-204ENST00000526558 RUSC2Q8N2Y8 1516 aa33.43■■■□□ 2.94
PTDSS2-204ENST00000526558 TRHP20396 242 aaPredicted RBP33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms