RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
SEC23A-215ENST00000625395 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
SEC23A-215ENST00000625395 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
SEC23A-215ENST00000625395 PHF23Q9BUL5 403 aaPredicted RBP19.93■□□□□ 0.78
SEC23A-215ENST00000625395 FOXD1Q16676 465 aa18.53■□□□□ 0.56
SEC23A-215ENST00000625395 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
SEC23A-215ENST00000625395 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
SEC23A-215ENST00000625395 ADRA2BP18089 450 aa17.58■□□□□ 0.4
SEC23A-215ENST00000625395 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
SEC23A-215ENST00000625395 MSH5O43196 834 aa17.26■□□□□ 0.35
SEC23A-215ENST00000625395 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
SEC23A-215ENST00000625395 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
SEC23A-215ENST00000625395 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
SEC23A-215ENST00000625395 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
SEC23A-215ENST00000625395 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
SEC23A-215ENST00000625395 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
SEC23A-215ENST00000625395 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
SEC23A-215ENST00000625395 RNF216Q9NWF9 866 aaPredicted RBP15.56■□□□□ 0.08
SEC23A-215ENST00000625395 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
SEC23A-215ENST00000625395 KCNA4P22459 653 aa15.48■□□□□ 0.07
SEC23A-215ENST00000625395 NPM3O75607 178 aaKnown RBP15.42■□□□□ 0.06
SEC23A-215ENST00000625395 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
SEC23A-215ENST00000625395 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
SEC23A-215ENST00000625395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
SEC23A-215ENST00000625395 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
SEC23A-215ENST00000625395 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
SEC23A-215ENST00000625395 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
SEC23A-215ENST00000625395 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
SEC23A-215ENST00000625395 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
SEC23A-215ENST00000625395 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
SEC23A-215ENST00000625395 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
SEC23A-215ENST00000625395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
SEC23A-215ENST00000625395 HNRNPUL2Q1KMD3 747 aaKnown RBP14.34□□□□□ -0.11
SEC23A-215ENST00000625395 MYCNP04198 464 aaPredicted RBP14.31□□□□□ -0.12
SEC23A-215ENST00000625395 APLP2Q06481 763 aa14.26□□□□□ -0.13
SEC23A-215ENST00000625395 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
SEC23A-215ENST00000625395 ZBTB22O15209 634 aa14.23□□□□□ -0.13
SEC23A-215ENST00000625395 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
SEC23A-215ENST00000625395 CAPN15O75808 1086 aa14.05□□□□□ -0.16
SEC23A-215ENST00000625395 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
SEC23A-215ENST00000625395 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
SEC23A-215ENST00000625395 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
SEC23A-215ENST00000625395 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
SEC23A-215ENST00000625395 DSG3P32926 999 aa13.93□□□□□ -0.18
SEC23A-215ENST00000625395 TRHP20396 242 aaPredicted RBP13.92□□□□□ -0.18
SEC23A-215ENST00000625395 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.2
SEC23A-215ENST00000625395 ABCB7O75027 752 aa13.72□□□□□ -0.21
SEC23A-215ENST00000625395 POLA2Q14181 598 aa13.69□□□□□ -0.22
SEC23A-215ENST00000625395 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
SEC23A-215ENST00000625395 FBLN2P98095 1184 aa13.36□□□□□ -0.27
SEC23A-215ENST00000625395 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
SEC23A-215ENST00000625395 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
SEC23A-215ENST00000625395 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
SEC23A-215ENST00000625395 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
SEC23A-215ENST00000625395 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
SEC23A-215ENST00000625395 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
SEC23A-215ENST00000625395 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
SEC23A-215ENST00000625395 SSUH2Q9Y2M2 353 aa13.02□□□□□ -0.33
SEC23A-215ENST00000625395 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
SEC23A-215ENST00000625395 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
SEC23A-215ENST00000625395 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
SEC23A-215ENST00000625395 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
SEC23A-215ENST00000625395 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEC23A-215ENST00000625395 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
SEC23A-215ENST00000625395 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
SEC23A-215ENST00000625395 PROM2Q8N271 834 aa12.73□□□□□ -0.37
SEC23A-215ENST00000625395 STAG3Q9UJ98 1225 aa12.66□□□□□ -0.38
SEC23A-215ENST00000625395 FKBP8Q14318 412 aa12.64□□□□□ -0.39
SEC23A-215ENST00000625395 POTEHQ6S545 545 aa12.64□□□□□ -0.39
SEC23A-215ENST00000625395 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
SEC23A-215ENST00000625395 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
SEC23A-215ENST00000625395 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
SEC23A-215ENST00000625395 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
SEC23A-215ENST00000625395 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
SEC23A-215ENST00000625395 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
SEC23A-215ENST00000625395 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
SEC23A-215ENST00000625395 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
SEC23A-215ENST00000625395 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
SEC23A-215ENST00000625395 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
SEC23A-215ENST00000625395 MNX1P50219 401 aaPredicted RBP12.22□□□□□ -0.45
SEC23A-215ENST00000625395 HAX1O00165 279 aa12.21□□□□□ -0.45
SEC23A-215ENST00000625395 MIER1Q8N108 512 aa12.21□□□□□ -0.45
SEC23A-215ENST00000625395 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
SEC23A-215ENST00000625395 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
SEC23A-215ENST00000625395 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
SEC23A-215ENST00000625395 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
SEC23A-215ENST00000625395 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
SEC23A-215ENST00000625395 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
SEC23A-215ENST00000625395 SP7Q8TDD2 431 aaPredicted RBP12.07□□□□□ -0.48
SEC23A-215ENST00000625395 EVX2Q03828 476 aa12.05□□□□□ -0.48
SEC23A-215ENST00000625395 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
SEC23A-215ENST00000625395 CLCN6P51797 869 aa12.03□□□□□ -0.48
SEC23A-215ENST00000625395 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
SEC23A-215ENST00000625395 NUBP1P53384 320 aa11.96□□□□□ -0.49
SEC23A-215ENST00000625395 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
SEC23A-215ENST00000625395 IFNLR1Q8IU57 520 aaPredicted RBP11.94□□□□□ -0.5
SEC23A-215ENST00000625395 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
SEC23A-215ENST00000625395 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
SEC23A-215ENST00000625395 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
SEC23A-215ENST00000625395 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms