RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
XRCC6-208ENST00000478914 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
XRCC6-208ENST00000478914 ABCC9O60706 1549 aa19.18■□□□□ 0.66
XRCC6-208ENST00000478914 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
XRCC6-208ENST00000478914 NACADO15069 1562 aa18.26■□□□□ 0.51
XRCC6-208ENST00000478914 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
XRCC6-208ENST00000478914 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
XRCC6-208ENST00000478914 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
XRCC6-208ENST00000478914 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
XRCC6-208ENST00000478914 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
XRCC6-208ENST00000478914 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
XRCC6-208ENST00000478914 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
XRCC6-208ENST00000478914 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.44
XRCC6-208ENST00000478914 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
XRCC6-208ENST00000478914 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
XRCC6-208ENST00000478914 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
XRCC6-208ENST00000478914 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
XRCC6-208ENST00000478914 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
XRCC6-208ENST00000478914 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
XRCC6-208ENST00000478914 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
XRCC6-208ENST00000478914 SMARCA2P51531 1590 aa16.8■□□□□ 0.28
XRCC6-208ENST00000478914 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
XRCC6-208ENST00000478914 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
XRCC6-208ENST00000478914 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
XRCC6-208ENST00000478914 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
XRCC6-208ENST00000478914 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
XRCC6-208ENST00000478914 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
XRCC6-208ENST00000478914 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
XRCC6-208ENST00000478914 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
XRCC6-208ENST00000478914 NESP48681 1621 aa16.5■□□□□ 0.23
XRCC6-208ENST00000478914 CUX2O14529 1486 aa16.49■□□□□ 0.23
XRCC6-208ENST00000478914 WIZO95785 1651 aa16.49■□□□□ 0.23
XRCC6-208ENST00000478914 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
XRCC6-208ENST00000478914 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
XRCC6-208ENST00000478914 THOC2Q8NI27 1593 aaKnown RBP16.35■□□□□ 0.21
XRCC6-208ENST00000478914 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
XRCC6-208ENST00000478914 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
XRCC6-208ENST00000478914 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
XRCC6-208ENST00000478914 TOP2AP11388 1531 aaKnown RBP16.28■□□□□ 0.2
XRCC6-208ENST00000478914 MRC2Q9UBG0 1479 aa16.2■□□□□ 0.18
XRCC6-208ENST00000478914 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
XRCC6-208ENST00000478914 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
XRCC6-208ENST00000478914 CFTRP13569 1480 aa16.15■□□□□ 0.18
XRCC6-208ENST00000478914 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
XRCC6-208ENST00000478914 WDR62O43379 1518 aa16.14■□□□□ 0.18
XRCC6-208ENST00000478914 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
XRCC6-208ENST00000478914 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
XRCC6-208ENST00000478914 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
XRCC6-208ENST00000478914 ABCC8Q09428 1581 aa15.87■□□□□ 0.13
XRCC6-208ENST00000478914 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
XRCC6-208ENST00000478914 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
XRCC6-208ENST00000478914 IFT140Q96RY7 1462 aa15.83■□□□□ 0.12
XRCC6-208ENST00000478914 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
XRCC6-208ENST00000478914 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
XRCC6-208ENST00000478914 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
XRCC6-208ENST00000478914 OSCARQ8IYS5 282 aa15.74■□□□□ 0.11
XRCC6-208ENST00000478914 TARBP1Q13395 1621 aaKnown RBP15.71■□□□□ 0.11
XRCC6-208ENST00000478914 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
XRCC6-208ENST00000478914 CHD1O14646 1710 aa15.64■□□□□ 0.09
XRCC6-208ENST00000478914 SOGA1O94964 1423 aa15.63■□□□□ 0.09
XRCC6-208ENST00000478914 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.09
XRCC6-208ENST00000478914 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
XRCC6-208ENST00000478914 CUX1P39880 1505 aa15.63■□□□□ 0.09
XRCC6-208ENST00000478914 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
XRCC6-208ENST00000478914 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
XRCC6-208ENST00000478914 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
XRCC6-208ENST00000478914 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
XRCC6-208ENST00000478914 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
XRCC6-208ENST00000478914 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
XRCC6-208ENST00000478914 FBLN2P98095 1184 aa15.54■□□□□ 0.08
XRCC6-208ENST00000478914 PBRM1Q86U86 1689 aa15.52■□□□□ 0.08
XRCC6-208ENST00000478914 SNAPC4Q5SXM2 1469 aa15.51■□□□□ 0.07
XRCC6-208ENST00000478914 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
XRCC6-208ENST00000478914 GRIN2BQ13224 1484 aa15.49■□□□□ 0.07
XRCC6-208ENST00000478914 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
XRCC6-208ENST00000478914 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
XRCC6-208ENST00000478914 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
XRCC6-208ENST00000478914 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
XRCC6-208ENST00000478914 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
XRCC6-208ENST00000478914 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
XRCC6-208ENST00000478914 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
XRCC6-208ENST00000478914 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
XRCC6-208ENST00000478914 WRNQ14191 1432 aaPredicted RBP eCLIP15.43■□□□□ 0.06
XRCC6-208ENST00000478914 SYNJ2O15056 1496 aa15.42■□□□□ 0.06
XRCC6-208ENST00000478914 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
XRCC6-208ENST00000478914 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
XRCC6-208ENST00000478914 ARAP1Q96P48 1450 aa15.34■□□□□ 0.05
XRCC6-208ENST00000478914 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
XRCC6-208ENST00000478914 ERICH3Q5RHP9 1530 aa15.29■□□□□ 0.04
XRCC6-208ENST00000478914 GRIN2AQ12879 1464 aa15.29■□□□□ 0.04
XRCC6-208ENST00000478914 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
XRCC6-208ENST00000478914 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
XRCC6-208ENST00000478914 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
XRCC6-208ENST00000478914 NUP160Q12769 1436 aa15.2■□□□□ 0.02
XRCC6-208ENST00000478914 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
XRCC6-208ENST00000478914 CUL7Q14999 1698 aa15.15■□□□□ 0.02
XRCC6-208ENST00000478914 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
XRCC6-208ENST00000478914 ERCC6L2Q5T890 1561 aa15.14■□□□□ 0.01
XRCC6-208ENST00000478914 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
XRCC6-208ENST00000478914 PRG4Q92954 1404 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms