RNA–Protein interactions for RNA: ENST00000427839.5

SLC19A1-204, Transcript of solute carrier family 19 member 1, humanhuman

TSL 3

Gene SLC19A1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-204ENST00000427839 NISCHQ9Y2I1 1504 aa43.55■■■■■ 4.56
SLC19A1-204ENST00000427839 CCDC180Q9P1Z9 1646 aa38.69■■■■□ 3.78
SLC19A1-204ENST00000427839 ABCC9O60706 1549 aa38.3■■■■□ 3.72
SLC19A1-204ENST00000427839 DCAF8L2P0C7V8 631 aa36.6■■■■□ 3.45
SLC19A1-204ENST00000427839 RB1CC1Q8TDY2 1594 aa36.58■■■■□ 3.45
SLC19A1-204ENST00000427839 NACADO15069 1562 aa36.49■■■■□ 3.43
SLC19A1-204ENST00000427839 ZCCHC6Q5VYS8 1495 aaKnown RBP36.2■■■■□ 3.39
SLC19A1-204ENST00000427839 MYO15BQ96JP2 1530 aa36.17■■■■□ 3.38
SLC19A1-204ENST00000427839 DCAF1Q9Y4B6 1507 aa35.94■■■■□ 3.34
SLC19A1-204ENST00000427839 PABPN1Q86U42 306 aaKnown RBP eCLIP35.83■■■■□ 3.33
SLC19A1-204ENST00000427839 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
SLC19A1-204ENST00000427839 BICRAQ9NZM4 1560 aa35.6■■■■□ 3.29
SLC19A1-204ENST00000427839 DNAJC5BQ9UF47 199 aa35.53■■■■□ 3.28
SLC19A1-204ENST00000427839 SCRIBQ14160 1630 aa35.42■■■■□ 3.26
SLC19A1-204ENST00000427839 SHROOM4Q9ULL8 1493 aa35.02■■■■□ 3.2
SLC19A1-204ENST00000427839 EIF4G1Q04637 1599 aaKnown RBP34.63■■■■□ 3.13
SLC19A1-204ENST00000427839 CC2D2AQ9P2K1 1620 aa34.57■■■■□ 3.12
SLC19A1-204ENST00000427839 CECR2Q9BXF3 1484 aa34.39■■■■□ 3.1
SLC19A1-204ENST00000427839 SMARCA4P51532 1647 aa33.82■■■■□ 3
SLC19A1-204ENST00000427839 ATAD2BQ9ULI0 1458 aa33.75■■■□□ 2.99
SLC19A1-204ENST00000427839 NCAPD3P42695 1498 aa33.74■■■□□ 2.99
SLC19A1-204ENST00000427839 BAZ1AQ9NRL2 1556 aaPredicted RBP33.71■■■□□ 2.99
SLC19A1-204ENST00000427839 MROH2BQ7Z745 1585 aa33.62■■■□□ 2.97
SLC19A1-204ENST00000427839 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
SLC19A1-204ENST00000427839 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
SLC19A1-204ENST00000427839 PEG3Q9GZU2 1588 aa33.46■■■□□ 2.95
SLC19A1-204ENST00000427839 BAZ1BQ9UIG0 1483 aaKnown RBP33.41■■■□□ 2.94
SLC19A1-204ENST00000427839 WIZO95785 1651 aa33.21■■■□□ 2.91
SLC19A1-204ENST00000427839 RSF1Q96T23 1441 aaPredicted RBP33.14■■■□□ 2.9
SLC19A1-204ENST00000427839 NESP48681 1621 aa33.1■■■□□ 2.89
SLC19A1-204ENST00000427839 ERCC6Q03468 1493 aa32.94■■■□□ 2.86
SLC19A1-204ENST00000427839 LAMC3Q9Y6N6 1575 aa32.82■■■□□ 2.84
SLC19A1-204ENST00000427839 TOP2AP11388 1531 aaKnown RBP32.78■■■□□ 2.84
SLC19A1-204ENST00000427839 CADPSQ9ULU8 1353 aa32.76■■■□□ 2.83
SLC19A1-204ENST00000427839 CUX2O14529 1486 aa32.65■■■□□ 2.82
SLC19A1-204ENST00000427839 PDS5BQ9NTI5 1447 aa32.64■■■□□ 2.82
SLC19A1-204ENST00000427839 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
SLC19A1-204ENST00000427839 THOC2Q8NI27 1593 aaKnown RBP32.54■■■□□ 2.8
SLC19A1-204ENST00000427839 CFTRP13569 1480 aa32.5■■■□□ 2.79
SLC19A1-204ENST00000427839 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
SLC19A1-204ENST00000427839 FANCD2Q9BXW9 1451 aa32.38■■■□□ 2.77
SLC19A1-204ENST00000427839 MRC2Q9UBG0 1479 aa32.34■■■□□ 2.77
SLC19A1-204ENST00000427839 CEP164Q9UPV0 1460 aa32.32■■■□□ 2.76
SLC19A1-204ENST00000427839 WDR62O43379 1518 aa32.23■■■□□ 2.75
SLC19A1-204ENST00000427839 SUPT5HO00267 1087 aaKnown RBP32.17■■■□□ 2.74
SLC19A1-204ENST00000427839 URB2Q14146 1524 aaKnown RBP32.11■■■□□ 2.73
SLC19A1-204ENST00000427839 DNAJC5Q9H3Z4 198 aa32.08■■■□□ 2.73
SLC19A1-204ENST00000427839 PRDM2Q13029 1718 aa32.07■■■□□ 2.72
SLC19A1-204ENST00000427839 TOPBP1Q92547 1522 aa31.84■■■□□ 2.69
SLC19A1-204ENST00000427839 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
SLC19A1-204ENST00000427839 ABCC8Q09428 1581 aa31.71■■■□□ 2.67
SLC19A1-204ENST00000427839 IFT140Q96RY7 1462 aa31.65■■■□□ 2.66
SLC19A1-204ENST00000427839 ZNF608Q9ULD9 1512 aaPredicted RBP31.65■■■□□ 2.66
SLC19A1-204ENST00000427839 POLA1P09884 1462 aaPredicted RBP31.55■■■□□ 2.64
SLC19A1-204ENST00000427839 CUX1P39880 1505 aa31.53■■■□□ 2.64
SLC19A1-204ENST00000427839 TARBP1Q13395 1621 aaKnown RBP31.49■■■□□ 2.63
SLC19A1-204ENST00000427839 RAD54L2Q9Y4B4 1467 aa31.49■■■□□ 2.63
SLC19A1-204ENST00000427839 FGD5Q6ZNL6 1462 aa31.45■■■□□ 2.62
SLC19A1-204ENST00000427839 SOGA1O94964 1423 aa31.43■■■□□ 2.62
SLC19A1-204ENST00000427839 AQRO60306 1485 aaKnown RBP eCLIP31.43■■■□□ 2.628e-9■■■■■ 38.8
SLC19A1-204ENST00000427839 EIF4G3O43432 1585 aaKnown RBP31.4■■■□□ 2.62
SLC19A1-204ENST00000427839 TDRD9Q8NDG6 1382 aaKnown RBP31.34■■■□□ 2.61
SLC19A1-204ENST00000427839 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
SLC19A1-204ENST00000427839 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
SLC19A1-204ENST00000427839 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
SLC19A1-204ENST00000427839 WDR97A6NE52 1622 aa31.13■■■□□ 2.57
SLC19A1-204ENST00000427839 TOP2BQ02880 1626 aa31.12■■■□□ 2.57
SLC19A1-204ENST00000427839 BIVM-ERCC5R4GMW8 1640 aa31.1■■■□□ 2.57
SLC19A1-204ENST00000427839 FBLN2P98095 1184 aa31.1■■■□□ 2.57
SLC19A1-204ENST00000427839 ABCA10Q8WWZ4 1543 aa31.09■■■□□ 2.57
SLC19A1-204ENST00000427839 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
SLC19A1-204ENST00000427839 GRIN2BQ13224 1484 aa31.05■■■□□ 2.56
SLC19A1-204ENST00000427839 CHD1O14646 1710 aa31.04■■■□□ 2.56
SLC19A1-204ENST00000427839 GAPVD1Q14C86 1478 aa31.03■■■□□ 2.56
SLC19A1-204ENST00000427839 ABCA5Q8WWZ7 1642 aa30.98■■■□□ 2.55
SLC19A1-204ENST00000427839 MAGI1Q96QZ7 1491 aaPredicted RBP30.96■■■□□ 2.55
SLC19A1-204ENST00000427839 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
SLC19A1-204ENST00000427839 CHMP7Q8WUX9 453 aaPredicted RBP30.93■■■□□ 2.54
SLC19A1-204ENST00000427839 PBRM1Q86U86 1689 aa30.91■■■□□ 2.54
SLC19A1-204ENST00000427839 SYNJ2O15056 1496 aa30.88■■■□□ 2.53
SLC19A1-204ENST00000427839 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
SLC19A1-204ENST00000427839 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
SLC19A1-204ENST00000427839 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
SLC19A1-204ENST00000427839 ARHGEF11O15085 1522 aa30.81■■■□□ 2.52
SLC19A1-204ENST00000427839 CLASP1Q7Z460 1538 aa30.73■■■□□ 2.51
SLC19A1-204ENST00000427839 ADAMTS12P58397 1594 aa30.7■■■□□ 2.5
SLC19A1-204ENST00000427839 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
SLC19A1-204ENST00000427839 FHAD1B1AJZ9 1412 aa30.66■■■□□ 2.5
SLC19A1-204ENST00000427839 GRIN2AQ12879 1464 aa30.66■■■□□ 2.5
SLC19A1-204ENST00000427839 CYB5RLQ6IPT4 315 aa30.62■■■□□ 2.49
SLC19A1-204ENST00000427839 ARAP1Q96P48 1450 aa30.58■■■□□ 2.49
SLC19A1-204ENST00000427839 NUP160Q12769 1436 aa30.55■■■□□ 2.48
SLC19A1-204ENST00000427839 KIF27Q86VH2 1401 aa30.55■■■□□ 2.48
SLC19A1-204ENST00000427839 IGF1RP08069 1367 aa30.54■■■□□ 2.48
SLC19A1-204ENST00000427839 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
SLC19A1-204ENST00000427839 ERCC6L2Q5T890 1561 aa30.39■■■□□ 2.46
SLC19A1-204ENST00000427839 RUSC2Q8N2Y8 1516 aa30.34■■■□□ 2.45
SLC19A1-204ENST00000427839 CARMIL1Q5VZK9 1371 aa30.32■■■□□ 2.44
SLC19A1-204ENST00000427839 CUL7Q14999 1698 aa30.3■■■□□ 2.44
SLC19A1-204ENST00000427839 SHROOM2Q13796 1616 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms