Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TOMM40O96008 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
TOMM40O96008 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TOMM40O96008 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TOMM40O96008 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TOMM40O96008 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
TOMM40O96008 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
TOMM40O96008 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.52□□□□□ -0.4
TOMM40O96008 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TOMM40O96008 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
TOMM40O96008 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
TOMM40O96008 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TOMM40O96008 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.52□□□□□ -0.4
TOMM40O96008 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 AC002056.1-201ENST00000395613 760 ntBASIC12.52□□□□□ -0.41
TOMM40O96008 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.52□□□□□ -0.41
TOMM40O96008 AC018845.2-201ENST00000568326 409 ntBASIC12.52□□□□□ -0.41
TOMM40O96008 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.52□□□□□ -0.41
TOMM40O96008 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 AC020658.6-201ENST00000623564 1870 ntBASIC12.52□□□□□ -0.41
TOMM40O96008 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 AC104109.2-201ENST00000602919 1418 ntBASIC12.52□□□□□ -0.41
TOMM40O96008 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.41
TOMM40O96008 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TOMM40O96008 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TOMM40O96008 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.52□□□□□ -0.41
TOMM40O96008 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TOMM40O96008 AC005089.1-201ENST00000619486 2241 ntBASIC12.52□□□□□ -0.41
TOMM40O96008 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.51□□□□□ -0.41
TOMM40O96008 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TOMM40O96008 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.51□□□□□ -0.41
TOMM40O96008 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.51□□□□□ -0.41
TOMM40O96008 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.51□□□□□ -0.41
TOMM40O96008 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TOMM40O96008 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.51□□□□□ -0.41
TOMM40O96008 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.51□□□□□ -0.41
TOMM40O96008 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.51□□□□□ -0.41
TOMM40O96008 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TOMM40O96008 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.51□□□□□ -0.41
TOMM40O96008 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TOMM40O96008 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.51□□□□□ -0.41
TOMM40O96008 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TOMM40O96008 TPM4P1-201ENST00000436100 807 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms