Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HDGFL3Q9Y3E1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 AC136604.1-201ENST00000418535 575 ntBASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 TREML5P-201ENST00000421694 576 ntBASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 AC097493.3-201ENST00000509725 367 ntBASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDGFL3Q9Y3E1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 AC092580.3-201ENST00000430932 139 ntBASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 RN7SL618P-201ENST00000477850 296 ntBASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 RFPL4AP1-201ENST00000530883 850 ntBASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 HNRNPUP1-201ENST00000554987 333 ntBASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 AC106028.4-201ENST00000614509 607 ntBASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 AC087499.5-201ENST00000452760 1342 ntBASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.3□□□□□ -0.12
HDGFL3Q9Y3E1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDGFL3Q9Y3E1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms