Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO3Q9BXY4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO3Q9BXY4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO3Q9BXY4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.58□□□□□ -0.08
RSPO3Q9BXY4 AC023908.3-201ENST00000564211 3047 ntBASIC14.58□□□□□ -0.08
RSPO3Q9BXY4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 SPDYE17-201ENST00000412399 783 ntBASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 AC074338.1-201ENST00000416825 156 ntBASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 GPALPP1-207ENST00000611650 899 ntBASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO3Q9BXY4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 AC018529.1-201ENST00000613063 361 ntBASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO3Q9BXY4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms