Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 KLF2P3-201ENST00000451977 1087 ntBASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 RN7SL589P-201ENST00000481268 310 ntBASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 RN7SL204P-201ENST00000582831 262 ntBASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 AL358472.5-202ENST00000641448 1267 ntBASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 TUBB3P1-201ENST00000405796 1332 ntBASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRFAM7AQ494W8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AC092919.2-201ENST00000623631 1645 ntBASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AC107890.1-201ENST00000422478 521 ntBASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AL592309.1-201ENST00000443127 649 ntBASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AL512638.1-201ENST00000457493 794 ntBASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AC069335.1-201ENST00000489972 472 ntBASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 IGHV3-42-201ENST00000520410 361 ntBASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRFAM7AQ494W8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 AL355306.1-201ENST00000415580 579 ntBASIC14.03□□□□□ -0.16
CHRFAM7AQ494W8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms