Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SART3-203ENST00000546611 1184 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.28□□□□□ -0.12
SCN1BQ07699 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.28□□□□□ -0.12
SCN1BQ07699 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 TERC-201ENST00000602385 541 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 AL589182.2-201ENST00000619332 1049 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
SCN1BQ07699 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SCN1BQ07699 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SCN1BQ07699 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SCN1BQ07699 PTENP1-202ENST00000532280 3996 ntBASIC14.28□□□□□ -0.12
SCN1BQ07699 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.28□□□□□ -0.12
SCN1BQ07699 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SCN1BQ07699 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCN1BQ07699 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN1BQ07699 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN1BQ07699 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SCN1BQ07699 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.27□□□□□ -0.12
SCN1BQ07699 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.27□□□□□ -0.12
SCN1BQ07699 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
SCN1BQ07699 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
SCN1BQ07699 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SCN1BQ07699 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
SCN1BQ07699 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN1BQ07699 AL512652.2-201ENST00000625156 1716 ntBASIC14.27□□□□□ -0.12
SCN1BQ07699 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
SCN1BQ07699 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SCN1BQ07699 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.27□□□□□ -0.12
SCN1BQ07699 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCN1BQ07699 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SCN1BQ07699 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN1BQ07699 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN1BQ07699 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.27□□□□□ -0.13
SCN1BQ07699 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
SCN1BQ07699 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.27□□□□□ -0.13
SCN1BQ07699 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.27□□□□□ -0.13
SCN1BQ07699 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN1BQ07699 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.27□□□□□ -0.13
SCN1BQ07699 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.27□□□□□ -0.13
SCN1BQ07699 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN1BQ07699 AC012313.10-201ENST00000623509 926 ntBASIC14.27□□□□□ -0.13
SCN1BQ07699 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN1BQ07699 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SCN1BQ07699 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN1BQ07699 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN1BQ07699 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
SCN1BQ07699 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SCN1BQ07699 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN1BQ07699 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
SCN1BQ07699 PCGF3-213ENST00000620529 1899 ntBASIC14.27□□□□□ -0.13
SCN1BQ07699 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SCN1BQ07699 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SCN1BQ07699 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN1BQ07699 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN1BQ07699 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN1BQ07699 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.27□□□□□ -0.13
SCN1BQ07699 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCN1BQ07699 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 AC015656.1-201ENST00000624209 3578 ntBASIC14.26□□□□□ -0.13
SCN1BQ07699 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN1BQ07699 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SCN1BQ07699 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.26□□□□□ -0.13
SCN1BQ07699 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SCN1BQ07699 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN1BQ07699 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.26□□□□□ -0.13
SCN1BQ07699 FGFR3P6-201ENST00000457012 610 ntBASIC14.26□□□□□ -0.13
SCN1BQ07699 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.26□□□□□ -0.13
SCN1BQ07699 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms