Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ITGA6P23229 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.46■□□□□ 0.71
ITGA6P23229 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ITGA6P23229 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.46■□□□□ 0.71
ITGA6P23229 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ITGA6P23229 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.46■□□□□ 0.71
ITGA6P23229 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.46■□□□□ 0.71
ITGA6P23229 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
ITGA6P23229 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.46■□□□□ 0.71
ITGA6P23229 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.46■□□□□ 0.71
ITGA6P23229 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ITGA6P23229 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.46■□□□□ 0.71
ITGA6P23229 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.46■□□□□ 0.71
ITGA6P23229 MIR6775-201ENST00000617557 69 ntBASIC19.46■□□□□ 0.71
ITGA6P23229 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ITGA6P23229 LINC02447-202ENST00000501888 2146 ntBASIC19.46■□□□□ 0.71
ITGA6P23229 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ITGA6P23229 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
ITGA6P23229 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ITGA6P23229 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ITGA6P23229 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ITGA6P23229 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ITGA6P23229 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.46■□□□□ 0.71
ITGA6P23229 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.46■□□□□ 0.71
ITGA6P23229 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.45■□□□□ 0.7
ITGA6P23229 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.45■□□□□ 0.7
ITGA6P23229 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.45■□□□□ 0.7
ITGA6P23229 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 ANKRD19P-201ENST00000338192 862 ntBASIC19.45■□□□□ 0.7
ITGA6P23229 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.45■□□□□ 0.7
ITGA6P23229 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.45■□□□□ 0.7
ITGA6P23229 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ITGA6P23229 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.45■□□□□ 0.7
ITGA6P23229 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.45■□□□□ 0.7
ITGA6P23229 CLUHP6-201ENST00000580789 941 ntBASIC19.45■□□□□ 0.7
ITGA6P23229 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.45■□□□□ 0.7
ITGA6P23229 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ITGA6P23229 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.45■□□□□ 0.7
ITGA6P23229 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ITGA6P23229 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.44■□□□□ 0.7
ITGA6P23229 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.44■□□□□ 0.7
ITGA6P23229 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.44■□□□□ 0.7
ITGA6P23229 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.44■□□□□ 0.7
ITGA6P23229 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.44■□□□□ 0.7
ITGA6P23229 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.44■□□□□ 0.7
ITGA6P23229 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.44■□□□□ 0.7
ITGA6P23229 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.44■□□□□ 0.7
ITGA6P23229 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ITGA6P23229 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.44■□□□□ 0.7
ITGA6P23229 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.44■□□□□ 0.7
ITGA6P23229 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.44■□□□□ 0.7
ITGA6P23229 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.44■□□□□ 0.7
ITGA6P23229 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.44■□□□□ 0.7
ITGA6P23229 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
ITGA6P23229 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ITGA6P23229 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITGA6P23229 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ITGA6P23229 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
ITGA6P23229 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITGA6P23229 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ITGA6P23229 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms