Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC4Q9Y5F7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 MRPS18AP1-201ENST00000414458 589 ntBASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 AC009477.1-201ENST00000452936 217 ntBASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 AC044860.1-202ENST00000559481 777 ntBASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 AC022144.1-201ENST00000602255 1580 ntBASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGC4Q9Y5F7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AP005117.1-202ENST00000581724 1908 ntBASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 SPCS2P1-201ENST00000561636 679 ntBASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AC011467.4-201ENST00000594891 528 ntBASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AL109936.8-201ENST00000641772 604 ntBASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGC4Q9Y5F7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms