Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 MIR4651-201ENST00000582622 73 ntBASIC12.99□□□□□ -0.33
NKX6-2Q9C056 Z99916.2-201ENST00000604037 246 ntBASIC12.99□□□□□ -0.33
NKX6-2Q9C056 AC013467.2-201ENST00000605472 835 ntBASIC12.99□□□□□ -0.33
NKX6-2Q9C056 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NKX6-2Q9C056 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 MIR662-201ENST00000384847 95 ntBASIC12.98□□□□□ -0.33
NKX6-2Q9C056 MIR648-201ENST00000385046 94 ntBASIC12.98□□□□□ -0.33
NKX6-2Q9C056 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AC073912.3-201ENST00000624414 853 ntBASIC12.98□□□□□ -0.33
NKX6-2Q9C056 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NKX6-2Q9C056 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AC092135.3-201ENST00000624151 1846 ntBASIC12.97□□□□□ -0.33
NKX6-2Q9C056 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms