Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
CDC42P60953 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.65□□□□□ -0.06
CDC42P60953 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC42P60953 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.65□□□□□ -0.06
CDC42P60953 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 MIR4515-201ENST00000584082 81 ntBASIC14.65□□□□□ -0.06
CDC42P60953 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 AC023908.3-201ENST00000564211 3047 ntBASIC14.65□□□□□ -0.06
CDC42P60953 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDC42P60953 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42P60953 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
CDC42P60953 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.64□□□□□ -0.07
CDC42P60953 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDC42P60953 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CDC42P60953 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDC42P60953 AC091951.1-201ENST00000512854 2465 ntBASIC14.64□□□□□ -0.07
CDC42P60953 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC42P60953 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.64□□□□□ -0.07
CDC42P60953 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 FGFR3P6-201ENST00000457012 610 ntBASIC14.64□□□□□ -0.07
CDC42P60953 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 AP002469.2-201ENST00000531724 424 ntBASIC14.64□□□□□ -0.07
CDC42P60953 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.64□□□□□ -0.07
CDC42P60953 AC008608.2-201ENST00000606089 416 ntBASIC14.64□□□□□ -0.07
CDC42P60953 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.64□□□□□ -0.07
CDC42P60953 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC42P60953 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC42P60953 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42P60953 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDC42P60953 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC42P60953 AC026748.1-201ENST00000624349 3251 ntBASIC14.63□□□□□ -0.07
CDC42P60953 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.63□□□□□ -0.07
CDC42P60953 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDC42P60953 AC013726.1-201ENST00000563747 2285 ntBASIC14.63□□□□□ -0.07
CDC42P60953 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC42P60953 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDC42P60953 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42P60953 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.63□□□□□ -0.07
CDC42P60953 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDC42P60953 ATP5G2P1-201ENST00000433580 426 ntBASIC14.63□□□□□ -0.07
CDC42P60953 FOSL1P1-201ENST00000511041 816 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms