Protein–RNA interactions for Protein: P18505

GABRB1, Gamma-aminobutyric acid receptor subunit beta-1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1P18505 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GABRB1P18505 AC104581.4-201ENST00000623126 3052 ntBASIC14.4□□□□□ -0.1
GABRB1P18505 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.4□□□□□ -0.1
GABRB1P18505 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.4□□□□□ -0.1
GABRB1P18505 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.4□□□□□ -0.1
GABRB1P18505 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.4□□□□□ -0.11
GABRB1P18505 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
GABRB1P18505 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.39□□□□□ -0.11
GABRB1P18505 AC139749.1-202ENST00000617529 3139 ntBASIC14.39□□□□□ -0.11
GABRB1P18505 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 BNIP3P1-202ENST00000550043 1585 ntBASIC14.39□□□□□ -0.11
GABRB1P18505 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 AL645939.2-201ENST00000427340 991 ntBASIC14.39□□□□□ -0.11
GABRB1P18505 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB1P18505 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.39□□□□□ -0.11
GABRB1P18505 OR7E14P-202ENST00000530490 1290 ntBASIC14.39□□□□□ -0.11
GABRB1P18505 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB1P18505 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 AC087388.1-201ENST00000571370 1112 ntBASIC14.39□□□□□ -0.11
GABRB1P18505 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB1P18505 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GABRB1P18505 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GABRB1P18505 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.39□□□□□ -0.11
GABRB1P18505 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GABRB1P18505 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB1P18505 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.39□□□□□ -0.11
GABRB1P18505 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GABRB1P18505 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABRB1P18505 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GABRB1P18505 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GABRB1P18505 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
GABRB1P18505 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 AC007686.3-201ENST00000619017 3487 ntBASIC14.38□□□□□ -0.11
GABRB1P18505 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GABRB1P18505 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GABRB1P18505 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GABRB1P18505 AC092474.2-201ENST00000424288 719 ntBASIC14.38□□□□□ -0.11
GABRB1P18505 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.38□□□□□ -0.11
GABRB1P18505 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.38□□□□□ -0.11
GABRB1P18505 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.38□□□□□ -0.11
GABRB1P18505 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABRB1P18505 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
GABRB1P18505 AL356488.2-201ENST00000602755 427 ntBASIC14.38□□□□□ -0.11
GABRB1P18505 AL009183.1-201ENST00000603760 355 ntBASIC14.38□□□□□ -0.11
GABRB1P18505 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
GABRB1P18505 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.38□□□□□ -0.11
GABRB1P18505 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GABRB1P18505 AL358472.4-201ENST00000633140 710 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms