Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH17O14917 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.29■□□□□ 0.04
PCDH17O14917 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
PCDH17O14917 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 PCGF3-213ENST00000620529 1899 ntBASIC15.29■□□□□ 0.04
PCDH17O14917 U82695.1-201ENST00000635752 1889 ntBASIC15.29■□□□□ 0.04
PCDH17O14917 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDH17O14917 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDH17O14917 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 AC241585.1-201ENST00000433527 519 ntBASIC15.28■□□□□ 0.04
PCDH17O14917 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 AL512638.1-201ENST00000457493 794 ntBASIC15.28■□□□□ 0.04
PCDH17O14917 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDH17O14917 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDH17O14917 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDH17O14917 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDH17O14917 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
PCDH17O14917 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDH17O14917 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PCDH17O14917 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 AC126177.1-201ENST00000547829 2218 ntBASIC15.28■□□□□ 0.04
PCDH17O14917 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDH17O14917 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 AP005117.1-202ENST00000581724 1908 ntBASIC15.27■□□□□ 0.04
PCDH17O14917 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PCDH17O14917 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PCDH17O14917 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCDH17O14917 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDH17O14917 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDH17O14917 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDH17O14917 AC097493.3-201ENST00000509725 367 ntBASIC15.27■□□□□ 0.04
PCDH17O14917 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 IGHV3-42-201ENST00000520410 361 ntBASIC15.27■□□□□ 0.04
PCDH17O14917 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDH17O14917 AC190387.1-201ENST00000551683 408 ntBASIC15.27■□□□□ 0.04
PCDH17O14917 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.27■□□□□ 0.04
PCDH17O14917 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.27■□□□□ 0.04
PCDH17O14917 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDH17O14917 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH17O14917 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH17O14917 PRAL-201ENST00000624952 3286 ntBASIC15.27■□□□□ 0.03
PCDH17O14917 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDH17O14917 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH17O14917 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PCDH17O14917 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH17O14917 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDH17O14917 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.27■□□□□ 0.03
PCDH17O14917 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDH17O14917 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDH17O14917 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.27■□□□□ 0.03
PCDH17O14917 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDH17O14917 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH17O14917 FO538757.1-201ENST00000623083 1397 ntBASIC15.26■□□□□ 0.03
PCDH17O14917 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDH17O14917 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDH17O14917 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms