Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 SPDYE7P-202ENST00000420373 878 ntBASIC16.87■□□□□ 0.29
CD248Q9HCU0 AC142381.1-201ENST00000426099 345 ntBASIC16.87■□□□□ 0.29
CD248Q9HCU0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 AC092580.3-201ENST00000430932 139 ntBASIC16.87■□□□□ 0.29
CD248Q9HCU0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 CYP2A7P1-201ENST00000595391 815 ntBASIC16.87■□□□□ 0.29
CD248Q9HCU0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 AC092053.1-201ENST00000605787 1936 ntBASIC16.87■□□□□ 0.29
CD248Q9HCU0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CD248Q9HCU0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD248Q9HCU0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 AC002472.2-201ENST00000442739 958 ntBASIC16.86■□□□□ 0.29
CD248Q9HCU0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 AC097493.3-201ENST00000509725 367 ntBASIC16.86■□□□□ 0.29
CD248Q9HCU0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD248Q9HCU0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.86■□□□□ 0.29
CD248Q9HCU0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CD248Q9HCU0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD248Q9HCU0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms