Protein–RNA interactions for Protein: Q4VXF1

FAM74A3, Putative protein FAM74A3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM74A3Q4VXF1 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FAM74A3Q4VXF1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.77□□□□□ -0.36
FAM74A3Q4VXF1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
FAM74A3Q4VXF1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FAM74A3Q4VXF1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 AP003733.1-201ENST00000491725 852 ntBASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FAM74A3Q4VXF1 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 AC026271.2-201ENST00000428091 497 ntBASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 AC007967.3-201ENST00000434308 558 ntBASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 AL031731.1-201ENST00000642131 2094 ntBASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FAM74A3Q4VXF1 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
FAM74A3Q4VXF1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms