Protein–RNA interactions for Protein: Q9NRA1

PDGFC, Platelet-derived growth factor C, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFCQ9NRA1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.61■■□□□ 1.85
PDGFCQ9NRA1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.61■■□□□ 1.85
PDGFCQ9NRA1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDGFCQ9NRA1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PDGFCQ9NRA1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.61■■□□□ 1.85
PDGFCQ9NRA1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
PDGFCQ9NRA1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDGFCQ9NRA1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDGFCQ9NRA1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PDGFCQ9NRA1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.6■■□□□ 1.85
PDGFCQ9NRA1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
PDGFCQ9NRA1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDGFCQ9NRA1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDGFCQ9NRA1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.6■■□□□ 1.85
PDGFCQ9NRA1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDGFCQ9NRA1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.59■■□□□ 1.85
PDGFCQ9NRA1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PDGFCQ9NRA1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.59■■□□□ 1.85
PDGFCQ9NRA1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.59■■□□□ 1.85
PDGFCQ9NRA1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.59■■□□□ 1.85
PDGFCQ9NRA1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.59■■□□□ 1.85
PDGFCQ9NRA1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDGFCQ9NRA1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
PDGFCQ9NRA1 MIR4466-201ENST00000606121 54 ntBASIC26.58■■□□□ 1.85
PDGFCQ9NRA1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.58■■□□□ 1.85
PDGFCQ9NRA1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDGFCQ9NRA1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PDGFCQ9NRA1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
PDGFCQ9NRA1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PDGFCQ9NRA1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PDGFCQ9NRA1 MIR935-201ENST00000401179 91 ntBASIC26.57■■□□□ 1.84
PDGFCQ9NRA1 AL139246.5-201ENST00000606645 996 ntBASIC26.57■■□□□ 1.84
PDGFCQ9NRA1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
PDGFCQ9NRA1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PDGFCQ9NRA1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PDGFCQ9NRA1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.56■■□□□ 1.84
PDGFCQ9NRA1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PDGFCQ9NRA1 AL356740.2-201ENST00000601559 647 ntBASIC26.56■■□□□ 1.84
PDGFCQ9NRA1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.56■■□□□ 1.84
PDGFCQ9NRA1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PDGFCQ9NRA1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PDGFCQ9NRA1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
PDGFCQ9NRA1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.55■■□□□ 1.84
PDGFCQ9NRA1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
PDGFCQ9NRA1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.55■■□□□ 1.84
PDGFCQ9NRA1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDGFCQ9NRA1 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.55■■□□□ 1.84
PDGFCQ9NRA1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDGFCQ9NRA1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PDGFCQ9NRA1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
PDGFCQ9NRA1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.54■■□□□ 1.84
PDGFCQ9NRA1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PDGFCQ9NRA1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.54■■□□□ 1.84
PDGFCQ9NRA1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PDGFCQ9NRA1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PDGFCQ9NRA1 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.53■■□□□ 1.84
PDGFCQ9NRA1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.53■■□□□ 1.84
PDGFCQ9NRA1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.53■■□□□ 1.84
PDGFCQ9NRA1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDGFCQ9NRA1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PDGFCQ9NRA1 AC090877.2-201ENST00000558441 1738 ntBASIC26.53■■□□□ 1.84
PDGFCQ9NRA1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDGFCQ9NRA1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
PDGFCQ9NRA1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
PDGFCQ9NRA1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
PDGFCQ9NRA1 AC097639.1-201ENST00000565519 1891 ntBASIC26.52■■□□□ 1.84
PDGFCQ9NRA1 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.52■■□□□ 1.84
PDGFCQ9NRA1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
PDGFCQ9NRA1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.51■■□□□ 1.83
PDGFCQ9NRA1 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.51■■□□□ 1.83
PDGFCQ9NRA1 AL512631.2-201ENST00000604634 923 ntBASIC26.51■■□□□ 1.83
PDGFCQ9NRA1 AC110285.6-201ENST00000617652 491 ntBASIC26.51■■□□□ 1.83
PDGFCQ9NRA1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PDGFCQ9NRA1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PDGFCQ9NRA1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDGFCQ9NRA1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
PDGFCQ9NRA1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDGFCQ9NRA1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
PDGFCQ9NRA1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDGFCQ9NRA1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PDGFCQ9NRA1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDGFCQ9NRA1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDGFCQ9NRA1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.48■■□□□ 1.83
PDGFCQ9NRA1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDGFCQ9NRA1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.47■■□□□ 1.83
PDGFCQ9NRA1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.47■■□□□ 1.83
PDGFCQ9NRA1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.47■■□□□ 1.83
PDGFCQ9NRA1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDGFCQ9NRA1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.47■■□□□ 1.83
PDGFCQ9NRA1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.47■■□□□ 1.83
PDGFCQ9NRA1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.47■■□□□ 1.83
PDGFCQ9NRA1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PDGFCQ9NRA1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PDGFCQ9NRA1 AC096631.2-201ENST00000436136 790 ntBASIC26.46■■□□□ 1.83
PDGFCQ9NRA1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.46■■□□□ 1.83
PDGFCQ9NRA1 SNX5-217ENST00000606557 1087 ntBASIC26.46■■□□□ 1.83
PDGFCQ9NRA1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDGFCQ9NRA1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDGFCQ9NRA1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PDGFCQ9NRA1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms