Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALX4Q9H161 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ALX4Q9H161 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALX4Q9H161 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ALX4Q9H161 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALX4Q9H161 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALX4Q9H161 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALX4Q9H161 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ALX4Q9H161 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALX4Q9H161 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
ALX4Q9H161 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ALX4Q9H161 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ALX4Q9H161 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ALX4Q9H161 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALX4Q9H161 C9orf163-202ENST00000624034 2573 ntBASIC19.75■□□□□ 0.75
ALX4Q9H161 MIR639-201ENST00000384974 98 ntBASIC19.75■□□□□ 0.75
ALX4Q9H161 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ALX4Q9H161 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.75■□□□□ 0.75
ALX4Q9H161 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ALX4Q9H161 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALX4Q9H161 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ALX4Q9H161 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ALX4Q9H161 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALX4Q9H161 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALX4Q9H161 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ALX4Q9H161 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ALX4Q9H161 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.74■□□□□ 0.75
ALX4Q9H161 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ALX4Q9H161 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.74■□□□□ 0.75
ALX4Q9H161 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ALX4Q9H161 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ALX4Q9H161 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ALX4Q9H161 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
ALX4Q9H161 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALX4Q9H161 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.73■□□□□ 0.75
ALX4Q9H161 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALX4Q9H161 ABCB10P4-201ENST00000566803 2184 ntBASIC19.73■□□□□ 0.75
ALX4Q9H161 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ALX4Q9H161 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALX4Q9H161 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALX4Q9H161 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALX4Q9H161 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ALX4Q9H161 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.73■□□□□ 0.75
ALX4Q9H161 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ALX4Q9H161 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALX4Q9H161 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALX4Q9H161 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALX4Q9H161 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.72■□□□□ 0.75
ALX4Q9H161 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALX4Q9H161 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALX4Q9H161 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.72■□□□□ 0.75
ALX4Q9H161 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.72■□□□□ 0.75
ALX4Q9H161 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALX4Q9H161 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALX4Q9H161 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.71■□□□□ 0.75
ALX4Q9H161 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.71■□□□□ 0.75
ALX4Q9H161 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.71■□□□□ 0.75
ALX4Q9H161 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALX4Q9H161 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ALX4Q9H161 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALX4Q9H161 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ALX4Q9H161 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.7■□□□□ 0.74
ALX4Q9H161 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.7■□□□□ 0.74
ALX4Q9H161 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALX4Q9H161 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ALX4Q9H161 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.7■□□□□ 0.74
ALX4Q9H161 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALX4Q9H161 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALX4Q9H161 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALX4Q9H161 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALX4Q9H161 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.7■□□□□ 0.74
ALX4Q9H161 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.7■□□□□ 0.74
ALX4Q9H161 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.7■□□□□ 0.74
ALX4Q9H161 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALX4Q9H161 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALX4Q9H161 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.69■□□□□ 0.74
ALX4Q9H161 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.68■□□□□ 0.74
ALX4Q9H161 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.68■□□□□ 0.74
ALX4Q9H161 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALX4Q9H161 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ALX4Q9H161 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ALX4Q9H161 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALX4Q9H161 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.68■□□□□ 0.74
ALX4Q9H161 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
ALX4Q9H161 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ALX4Q9H161 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ALX4Q9H161 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ALX4Q9H161 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALX4Q9H161 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALX4Q9H161 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALX4Q9H161 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALX4Q9H161 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
ALX4Q9H161 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ALX4Q9H161 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ALX4Q9H161 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.66■□□□□ 0.74
ALX4Q9H161 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALX4Q9H161 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALX4Q9H161 MIR4449-201ENST00000578365 66 ntBASIC19.66■□□□□ 0.74
ALX4Q9H161 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ALX4Q9H161 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms