Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GAFA1Q96PS6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GAFA1Q96PS6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GAFA1Q96PS6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.61■□□□□ 0.73
GAFA1Q96PS6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GAFA1Q96PS6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.6■□□□□ 0.73
GAFA1Q96PS6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GAFA1Q96PS6 AC022616.5-201ENST00000518796 181 ntBASIC19.6■□□□□ 0.73
GAFA1Q96PS6 MIR6089-201ENST00000616698 64 ntBASIC19.6■□□□□ 0.73
GAFA1Q96PS6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.6■□□□□ 0.73
GAFA1Q96PS6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GAFA1Q96PS6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GAFA1Q96PS6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GAFA1Q96PS6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GAFA1Q96PS6 AC138932.3-201ENST00000567634 1902 ntBASIC19.59■□□□□ 0.73
GAFA1Q96PS6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GAFA1Q96PS6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.59■□□□□ 0.73
GAFA1Q96PS6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
GAFA1Q96PS6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.59■□□□□ 0.73
GAFA1Q96PS6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GAFA1Q96PS6 KRT8P33-201ENST00000508125 1423 ntBASIC19.59■□□□□ 0.73
GAFA1Q96PS6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GAFA1Q96PS6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GAFA1Q96PS6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 AC103834.1-201ENST00000520383 144 ntBASIC19.58■□□□□ 0.72
GAFA1Q96PS6 MIR4508-201ENST00000584178 70 ntBASIC19.58■□□□□ 0.72
GAFA1Q96PS6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.58■□□□□ 0.72
GAFA1Q96PS6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.57■□□□□ 0.72
GAFA1Q96PS6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
GAFA1Q96PS6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GAFA1Q96PS6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GAFA1Q96PS6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.56■□□□□ 0.72
GAFA1Q96PS6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
GAFA1Q96PS6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
GAFA1Q96PS6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.55■□□□□ 0.72
GAFA1Q96PS6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.55■□□□□ 0.72
GAFA1Q96PS6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GAFA1Q96PS6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GAFA1Q96PS6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.55■□□□□ 0.72
GAFA1Q96PS6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAFA1Q96PS6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
GAFA1Q96PS6 YBX1P4-201ENST00000392794 808 ntBASIC19.54■□□□□ 0.72
GAFA1Q96PS6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAFA1Q96PS6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAFA1Q96PS6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.54■□□□□ 0.72
GAFA1Q96PS6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.54■□□□□ 0.72
GAFA1Q96PS6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.54■□□□□ 0.72
GAFA1Q96PS6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GAFA1Q96PS6 AC090877.2-201ENST00000558441 1738 ntBASIC19.54■□□□□ 0.72
GAFA1Q96PS6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
GAFA1Q96PS6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
GAFA1Q96PS6 AP003733.4-201ENST00000623785 1697 ntBASIC19.52■□□□□ 0.72
GAFA1Q96PS6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAFA1Q96PS6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GAFA1Q96PS6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.52■□□□□ 0.72
GAFA1Q96PS6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.52■□□□□ 0.72
GAFA1Q96PS6 AC011551.1-201ENST00000614101 683 ntBASIC19.52■□□□□ 0.72
GAFA1Q96PS6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GAFA1Q96PS6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GAFA1Q96PS6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GAFA1Q96PS6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GAFA1Q96PS6 AC120024.1-201ENST00000562672 995 ntBASIC19.5■□□□□ 0.71
GAFA1Q96PS6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GAFA1Q96PS6 AC103724.3-201ENST00000564481 992 ntBASIC19.49■□□□□ 0.71
GAFA1Q96PS6 THA1P-201ENST00000590384 1145 ntBASIC19.49■□□□□ 0.71
GAFA1Q96PS6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
GAFA1Q96PS6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GAFA1Q96PS6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.49■□□□□ 0.71
GAFA1Q96PS6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms