Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF48Q96MX3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF48Q96MX3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF48Q96MX3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF48Q96MX3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF48Q96MX3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF48Q96MX3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF48Q96MX3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.1■□□□□ 0.65
ZNF48Q96MX3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
ZNF48Q96MX3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.09■□□□□ 0.65
ZNF48Q96MX3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ZNF48Q96MX3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZNF48Q96MX3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
ZNF48Q96MX3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
ZNF48Q96MX3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.08■□□□□ 0.64
ZNF48Q96MX3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ZNF48Q96MX3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF48Q96MX3 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF48Q96MX3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ZNF48Q96MX3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF48Q96MX3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ZNF48Q96MX3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF48Q96MX3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF48Q96MX3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF48Q96MX3 AC011551.1-201ENST00000614101 683 ntBASIC19.06■□□□□ 0.64
ZNF48Q96MX3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ZNF48Q96MX3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF48Q96MX3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF48Q96MX3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF48Q96MX3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 AC010997.5-201ENST00000609182 354 ntBASIC19.03■□□□□ 0.64
ZNF48Q96MX3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF48Q96MX3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 AC131281.2-201ENST00000520478 145 ntBASIC19.02■□□□□ 0.64
ZNF48Q96MX3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF48Q96MX3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
ZNF48Q96MX3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF48Q96MX3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF48Q96MX3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF48Q96MX3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms