Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC47A1Q96FL8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC47A1Q96FL8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC47A1Q96FL8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
SLC47A1Q96FL8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC47A1Q96FL8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC47A1Q96FL8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC47A1Q96FL8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SLC47A1Q96FL8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SLC47A1Q96FL8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 AC060814.1-201ENST00000554326 538 ntBASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC47A1Q96FL8 DUSP8P5-201ENST00000422884 1815 ntBASIC22.03■■□□□ 1.12
SLC47A1Q96FL8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.03■■□□□ 1.12
SLC47A1Q96FL8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SLC47A1Q96FL8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SLC47A1Q96FL8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
SLC47A1Q96FL8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.03■■□□□ 1.12
SLC47A1Q96FL8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC47A1Q96FL8 AC004812.2-201ENST00000611079 2094 ntBASIC22.02■■□□□ 1.12
SLC47A1Q96FL8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC47A1Q96FL8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC47A1Q96FL8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC47A1Q96FL8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC47A1Q96FL8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.02■■□□□ 1.11
SLC47A1Q96FL8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC47A1Q96FL8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC47A1Q96FL8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC47A1Q96FL8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.01■■□□□ 1.11
SLC47A1Q96FL8 AL157400.5-201ENST00000507624 621 ntBASIC22.01■■□□□ 1.11
SLC47A1Q96FL8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC47A1Q96FL8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SLC47A1Q96FL8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SLC47A1Q96FL8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22■■□□□ 1.11
SLC47A1Q96FL8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22■■□□□ 1.11
SLC47A1Q96FL8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SLC47A1Q96FL8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
SLC47A1Q96FL8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SLC47A1Q96FL8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SLC47A1Q96FL8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SLC47A1Q96FL8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22■■□□□ 1.11
SLC47A1Q96FL8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC47A1Q96FL8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22■■□□□ 1.11
SLC47A1Q96FL8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC47A1Q96FL8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC47A1Q96FL8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC47A1Q96FL8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC47A1Q96FL8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC47A1Q96FL8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC47A1Q96FL8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 AC025884.2-201ENST00000553429 711 ntBASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.97■■□□□ 1.11
SLC47A1Q96FL8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC47A1Q96FL8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC47A1Q96FL8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SLC47A1Q96FL8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC47A1Q96FL8 ABCB10P4-201ENST00000566803 2184 ntBASIC21.96■■□□□ 1.11
SLC47A1Q96FL8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.96■■□□□ 1.11
SLC47A1Q96FL8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC47A1Q96FL8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC47A1Q96FL8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SLC47A1Q96FL8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 MIR3960-201ENST00000583311 91 ntBASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 AC092296.2-201ENST00000589470 999 ntBASIC21.95■■□□□ 1.1
SLC47A1Q96FL8 AC022413.1-201ENST00000624602 984 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms