Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC37.32■■■■□ 3.56
CFAP43Q8NDM7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC37.31■■■■□ 3.56
CFAP43Q8NDM7 SUDS3P1-201ENST00000505831 966 ntBASIC37.31■■■■□ 3.56
CFAP43Q8NDM7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC37.31■■■■□ 3.56
CFAP43Q8NDM7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC37.31■■■■□ 3.56
CFAP43Q8NDM7 AL031432.3-201ENST00000607698 485 ntBASIC37.31■■■■□ 3.56
CFAP43Q8NDM7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC37.3■■■■□ 3.56
CFAP43Q8NDM7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC37.3■■■■□ 3.56
CFAP43Q8NDM7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
CFAP43Q8NDM7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
CFAP43Q8NDM7 AC011551.1-201ENST00000614101 683 ntBASIC37.28■■■■□ 3.56
CFAP43Q8NDM7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CFAP43Q8NDM7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC37.27■■■■□ 3.56
CFAP43Q8NDM7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CFAP43Q8NDM7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC37.26■■■■□ 3.56
CFAP43Q8NDM7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC37.26■■■■□ 3.56
CFAP43Q8NDM7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC37.26■■■■□ 3.55
CFAP43Q8NDM7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC37.25■■■■□ 3.55
CFAP43Q8NDM7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
CFAP43Q8NDM7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
CFAP43Q8NDM7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
CFAP43Q8NDM7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
CFAP43Q8NDM7 AK3-203ENST00000447596 705 ntTSL 2 BASIC37.25■■■■□ 3.55
CFAP43Q8NDM7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC37.25■■■■□ 3.55
CFAP43Q8NDM7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC37.24■■■■□ 3.55
CFAP43Q8NDM7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC37.23■■■■□ 3.55
CFAP43Q8NDM7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
CFAP43Q8NDM7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC37.23■■■■□ 3.55
CFAP43Q8NDM7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
CFAP43Q8NDM7 MIR5787-201ENST00000611784 55 ntBASIC37.23■■■■□ 3.55
CFAP43Q8NDM7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
CFAP43Q8NDM7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC37.23■■■■□ 3.55
CFAP43Q8NDM7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
CFAP43Q8NDM7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC37.22■■■■□ 3.55
CFAP43Q8NDM7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
CFAP43Q8NDM7 AC142381.2-201ENST00000566120 298 ntBASIC37.21■■■■□ 3.55
CFAP43Q8NDM7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC37.2■■■■□ 3.55
CFAP43Q8NDM7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
CFAP43Q8NDM7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC37.19■■■■□ 3.54
CFAP43Q8NDM7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
CFAP43Q8NDM7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
CFAP43Q8NDM7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC37.19■■■■□ 3.54
CFAP43Q8NDM7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC37.19■■■■□ 3.54
CFAP43Q8NDM7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
CFAP43Q8NDM7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 AL121749.1-202ENST00000609313 2153 ntBASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC37.18■■■■□ 3.54
CFAP43Q8NDM7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CFAP43Q8NDM7 CD72-202ENST00000378430 585 ntTSL 3 BASIC37.16■■■■□ 3.54
CFAP43Q8NDM7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC37.16■■■■□ 3.54
CFAP43Q8NDM7 ERN1-208ENST00000606895 2068 ntBASIC37.16■■■■□ 3.54
CFAP43Q8NDM7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
CFAP43Q8NDM7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC37.16■■■■□ 3.54
CFAP43Q8NDM7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
CFAP43Q8NDM7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC37.16■■■■□ 3.54
CFAP43Q8NDM7 AC010501.1-201ENST00000606270 1962 ntBASIC37.15■■■■□ 3.54
CFAP43Q8NDM7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC37.15■■■■□ 3.54
CFAP43Q8NDM7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC37.15■■■■□ 3.54
CFAP43Q8NDM7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC37.15■■■■□ 3.54
CFAP43Q8NDM7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC37.15■■■■□ 3.54
CFAP43Q8NDM7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC37.15■■■■□ 3.54
CFAP43Q8NDM7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC37.14■■■■□ 3.54
CFAP43Q8NDM7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CFAP43Q8NDM7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CFAP43Q8NDM7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC37.14■■■■□ 3.54
CFAP43Q8NDM7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC37.14■■■■□ 3.54
CFAP43Q8NDM7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC37.14■■■■□ 3.54
CFAP43Q8NDM7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC37.14■■■■□ 3.54
CFAP43Q8NDM7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC37.13■■■■□ 3.53
CFAP43Q8NDM7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC37.13■■■■□ 3.53
CFAP43Q8NDM7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC37.13■■■■□ 3.53
CFAP43Q8NDM7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC37.13■■■■□ 3.53
CFAP43Q8NDM7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CFAP43Q8NDM7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC37.12■■■■□ 3.53
CFAP43Q8NDM7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CFAP43Q8NDM7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms