Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.16■■□□□ 1.46
SIX5Q8N196 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SIX5Q8N196 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.16■■□□□ 1.46
SIX5Q8N196 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SIX5Q8N196 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SIX5Q8N196 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SIX5Q8N196 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.15■■□□□ 1.46
SIX5Q8N196 SRD5A1P1-201ENST00000442297 786 ntBASIC24.15■■□□□ 1.46
SIX5Q8N196 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.15■■□□□ 1.46
SIX5Q8N196 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.15■■□□□ 1.46
SIX5Q8N196 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SIX5Q8N196 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
SIX5Q8N196 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
SIX5Q8N196 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
SIX5Q8N196 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SIX5Q8N196 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SIX5Q8N196 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SIX5Q8N196 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
SIX5Q8N196 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SIX5Q8N196 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
SIX5Q8N196 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SIX5Q8N196 DRD5P2-201ENST00000421395 2012 ntBASIC24.14■■□□□ 1.45
SIX5Q8N196 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.14■■□□□ 1.45
SIX5Q8N196 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SIX5Q8N196 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SIX5Q8N196 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SIX5Q8N196 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SIX5Q8N196 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SIX5Q8N196 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SIX5Q8N196 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SIX5Q8N196 LINC01003-201ENST00000564834 1764 ntBASIC24.12■■□□□ 1.45
SIX5Q8N196 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SIX5Q8N196 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.12■■□□□ 1.45
SIX5Q8N196 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
SIX5Q8N196 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.12■■□□□ 1.45
SIX5Q8N196 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SIX5Q8N196 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SIX5Q8N196 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.11■■□□□ 1.45
SIX5Q8N196 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SIX5Q8N196 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
SIX5Q8N196 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.11■■□□□ 1.45
SIX5Q8N196 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SIX5Q8N196 SNX5-217ENST00000606557 1087 ntBASIC24.11■■□□□ 1.45
SIX5Q8N196 MIR6722-201ENST00000617286 78 ntBASIC24.11■■□□□ 1.45
SIX5Q8N196 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.11■■□□□ 1.45
SIX5Q8N196 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SIX5Q8N196 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.11■■□□□ 1.45
SIX5Q8N196 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SIX5Q8N196 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.1■■□□□ 1.45
SIX5Q8N196 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
SIX5Q8N196 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SIX5Q8N196 AL136967.2-201ENST00000623968 743 ntBASIC24.1■■□□□ 1.45
SIX5Q8N196 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
SIX5Q8N196 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SIX5Q8N196 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SIX5Q8N196 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
SIX5Q8N196 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SIX5Q8N196 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.09■■□□□ 1.45
SIX5Q8N196 AF213884.3-201ENST00000563833 479 ntBASIC24.09■■□□□ 1.45
SIX5Q8N196 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.09■■□□□ 1.45
SIX5Q8N196 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SIX5Q8N196 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.08■■□□□ 1.45
SIX5Q8N196 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SIX5Q8N196 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
SIX5Q8N196 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SIX5Q8N196 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
SIX5Q8N196 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
SIX5Q8N196 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
SIX5Q8N196 MIR6821-201ENST00000617625 74 ntBASIC24.07■■□□□ 1.44
SIX5Q8N196 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SIX5Q8N196 AC135731.1-201ENST00000569415 2548 ntBASIC24.06■■□□□ 1.44
SIX5Q8N196 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SIX5Q8N196 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SIX5Q8N196 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
SIX5Q8N196 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
SIX5Q8N196 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.05■■□□□ 1.44
SIX5Q8N196 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SIX5Q8N196 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.05■■□□□ 1.44
SIX5Q8N196 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.05■■□□□ 1.44
SIX5Q8N196 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.05■■□□□ 1.44
SIX5Q8N196 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SIX5Q8N196 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SIX5Q8N196 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SIX5Q8N196 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SIX5Q8N196 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.04■■□□□ 1.44
SIX5Q8N196 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SIX5Q8N196 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.04■■□□□ 1.44
SIX5Q8N196 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SIX5Q8N196 AP004609.3-201ENST00000610705 1884 ntBASIC24.04■■□□□ 1.44
SIX5Q8N196 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.04■■□□□ 1.44
SIX5Q8N196 MIR939-201ENST00000401314 82 ntBASIC24.03■■□□□ 1.44
SIX5Q8N196 AC097381.1-201ENST00000429019 1296 ntBASIC24.03■■□□□ 1.44
SIX5Q8N196 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.03■■□□□ 1.44
SIX5Q8N196 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SIX5Q8N196 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SIX5Q8N196 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SIX5Q8N196 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SIX5Q8N196 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.01■■□□□ 1.43
SIX5Q8N196 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SIX5Q8N196 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms