Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.16■■□□□ 1.3
CPNE9Q8IYJ1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE9Q8IYJ1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE9Q8IYJ1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE9Q8IYJ1 AC087393.1-201ENST00000582896 145 ntBASIC23.16■■□□□ 1.3
CPNE9Q8IYJ1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE9Q8IYJ1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPNE9Q8IYJ1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 MIR6089-201ENST00000616698 64 ntBASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CPNE9Q8IYJ1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CPNE9Q8IYJ1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CPNE9Q8IYJ1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
CPNE9Q8IYJ1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CPNE9Q8IYJ1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.14■■□□□ 1.29
CPNE9Q8IYJ1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPNE9Q8IYJ1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPNE9Q8IYJ1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPNE9Q8IYJ1 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.11■■□□□ 1.29
CPNE9Q8IYJ1 DUX4L18-201ENST00000553347 1267 ntBASIC23.11■■□□□ 1.29
CPNE9Q8IYJ1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.11■■□□□ 1.29
CPNE9Q8IYJ1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CPNE9Q8IYJ1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.11■■□□□ 1.29
CPNE9Q8IYJ1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.11■■□□□ 1.29
CPNE9Q8IYJ1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPNE9Q8IYJ1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPNE9Q8IYJ1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPNE9Q8IYJ1 LINC01124-201ENST00000409786 2117 ntBASIC23.1■■□□□ 1.29
CPNE9Q8IYJ1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.1■■□□□ 1.29
CPNE9Q8IYJ1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CPNE9Q8IYJ1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPNE9Q8IYJ1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.1■■□□□ 1.29
CPNE9Q8IYJ1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPNE9Q8IYJ1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.09■■□□□ 1.29
CPNE9Q8IYJ1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.09■■□□□ 1.29
CPNE9Q8IYJ1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CPNE9Q8IYJ1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.09■■□□□ 1.29
CPNE9Q8IYJ1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CPNE9Q8IYJ1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CPNE9Q8IYJ1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CPNE9Q8IYJ1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.08■■□□□ 1.29
CPNE9Q8IYJ1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CPNE9Q8IYJ1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CPNE9Q8IYJ1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CPNE9Q8IYJ1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CPNE9Q8IYJ1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CPNE9Q8IYJ1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPNE9Q8IYJ1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPNE9Q8IYJ1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CPNE9Q8IYJ1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CPNE9Q8IYJ1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.06■■□□□ 1.28
CPNE9Q8IYJ1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CPNE9Q8IYJ1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CPNE9Q8IYJ1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPNE9Q8IYJ1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CPNE9Q8IYJ1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CPNE9Q8IYJ1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.05■■□□□ 1.28
CPNE9Q8IYJ1 AC004987.1-201ENST00000428627 508 ntBASIC23.05■■□□□ 1.28
CPNE9Q8IYJ1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms