Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.26■□□□□ 0.83
RAI1Q7Z5J4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 MIR4466-201ENST00000606121 54 ntBASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 MIR3621-201ENST00000580529 85 ntBASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 MTDHP2-201ENST00000601468 714 ntBASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAI1Q7Z5J4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RAI1Q7Z5J4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.24■□□□□ 0.83
RAI1Q7Z5J4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAI1Q7Z5J4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RAI1Q7Z5J4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.24■□□□□ 0.83
RAI1Q7Z5J4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RAI1Q7Z5J4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.24■□□□□ 0.83
RAI1Q7Z5J4 AF131216.4-201ENST00000638924 1588 ntBASIC20.24■□□□□ 0.83
RAI1Q7Z5J4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAI1Q7Z5J4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.22■□□□□ 0.83
RAI1Q7Z5J4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.22■□□□□ 0.83
RAI1Q7Z5J4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RAI1Q7Z5J4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.22■□□□□ 0.83
RAI1Q7Z5J4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 AC010997.5-201ENST00000609182 354 ntBASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 AL136116.3-201ENST00000402907 1138 ntBASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAI1Q7Z5J4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI1Q7Z5J4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAI1Q7Z5J4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAI1Q7Z5J4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAI1Q7Z5J4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI1Q7Z5J4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAI1Q7Z5J4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.2■□□□□ 0.82
RAI1Q7Z5J4 AC096887.2-201ENST00000623443 1957 ntBASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 MIR935-201ENST00000401179 91 ntBASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.19■□□□□ 0.82
RAI1Q7Z5J4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.18■□□□□ 0.82
RAI1Q7Z5J4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAI1Q7Z5J4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI1Q7Z5J4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI1Q7Z5J4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI1Q7Z5J4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI1Q7Z5J4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 SNX5-217ENST00000606557 1087 ntBASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 AL139246.5-201ENST00000606645 996 ntBASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAI1Q7Z5J4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 AC010501.1-201ENST00000606270 1962 ntBASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAI1Q7Z5J4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms