Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF44Q7L0R7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.49■■□□□ 1.19
RNF44Q7L0R7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF44Q7L0R7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF44Q7L0R7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF44Q7L0R7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF44Q7L0R7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF44Q7L0R7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF44Q7L0R7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RNF44Q7L0R7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF44Q7L0R7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 AC009299.2-201ENST00000482477 511 ntBASIC22.47■■□□□ 1.19
RNF44Q7L0R7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF44Q7L0R7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RNF44Q7L0R7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF44Q7L0R7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF44Q7L0R7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF44Q7L0R7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RNF44Q7L0R7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
RNF44Q7L0R7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF44Q7L0R7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF44Q7L0R7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.45■■□□□ 1.18
RNF44Q7L0R7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RNF44Q7L0R7 AL035685.1-201ENST00000636663 812 ntBASIC22.45■■□□□ 1.18
RNF44Q7L0R7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF44Q7L0R7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF44Q7L0R7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF44Q7L0R7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.45■■□□□ 1.18
RNF44Q7L0R7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF44Q7L0R7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF44Q7L0R7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF44Q7L0R7 AC090877.2-201ENST00000558441 1738 ntBASIC22.44■■□□□ 1.18
RNF44Q7L0R7 MIR4281-201ENST00000580852 62 ntBASIC22.44■■□□□ 1.18
RNF44Q7L0R7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF44Q7L0R7 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF44Q7L0R7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF44Q7L0R7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF44Q7L0R7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF44Q7L0R7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF44Q7L0R7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF44Q7L0R7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF44Q7L0R7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RNF44Q7L0R7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF44Q7L0R7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF44Q7L0R7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF44Q7L0R7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF44Q7L0R7 MIR6089-201ENST00000616698 64 ntBASIC22.42■■□□□ 1.18
RNF44Q7L0R7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF44Q7L0R7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.42■■□□□ 1.18
RNF44Q7L0R7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF44Q7L0R7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RNF44Q7L0R7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF44Q7L0R7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RNF44Q7L0R7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
RNF44Q7L0R7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RNF44Q7L0R7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RNF44Q7L0R7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RNF44Q7L0R7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RNF44Q7L0R7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RNF44Q7L0R7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.39■■□□□ 1.17
RNF44Q7L0R7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.39■■□□□ 1.17
RNF44Q7L0R7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RNF44Q7L0R7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF44Q7L0R7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RNF44Q7L0R7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.37■■□□□ 1.17
RNF44Q7L0R7 AC137630.3-201ENST00000607245 391 ntBASIC22.37■■□□□ 1.17
RNF44Q7L0R7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF44Q7L0R7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 Z92544.1-202ENST00000571933 1220 ntBASIC22.36■■□□□ 1.17
RNF44Q7L0R7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RNF44Q7L0R7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms