Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHISA2Q6UWI4 AC024257.2-201ENST00000549699 147 ntBASIC18.33■□□□□ 0.52
SHISA2Q6UWI4 MIR6821-201ENST00000617625 74 ntBASIC18.33■□□□□ 0.52
SHISA2Q6UWI4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHISA2Q6UWI4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHISA2Q6UWI4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SHISA2Q6UWI4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SHISA2Q6UWI4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHISA2Q6UWI4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SHISA2Q6UWI4 AF131216.4-201ENST00000638924 1588 ntBASIC18.31■□□□□ 0.52
SHISA2Q6UWI4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHISA2Q6UWI4 DUX4L19-201ENST00000557448 1267 ntBASIC18.3■□□□□ 0.52
SHISA2Q6UWI4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SHISA2Q6UWI4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SHISA2Q6UWI4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHISA2Q6UWI4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 AC097381.1-201ENST00000429019 1296 ntBASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 AC004448.1-201ENST00000458332 883 ntBASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 AL136967.2-201ENST00000623968 743 ntBASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SHISA2Q6UWI4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 AF213884.3-201ENST00000563833 479 ntBASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA2Q6UWI4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SHISA2Q6UWI4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.27■□□□□ 0.52
SHISA2Q6UWI4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.27■□□□□ 0.52
SHISA2Q6UWI4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.27■□□□□ 0.51
SHISA2Q6UWI4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.27■□□□□ 0.51
SHISA2Q6UWI4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA2Q6UWI4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SHISA2Q6UWI4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA2Q6UWI4 AC091305.1-201ENST00000479476 895 ntBASIC18.26■□□□□ 0.51
SHISA2Q6UWI4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
SHISA2Q6UWI4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA2Q6UWI4 SNX5-217ENST00000606557 1087 ntBASIC18.26■□□□□ 0.51
SHISA2Q6UWI4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SHISA2Q6UWI4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 MIR939-201ENST00000401314 82 ntBASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 AC142472.1-201ENST00000612013 1741 ntBASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA2Q6UWI4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.24■□□□□ 0.51
SHISA2Q6UWI4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA2Q6UWI4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA2Q6UWI4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA2Q6UWI4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA2Q6UWI4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.24■□□□□ 0.51
SHISA2Q6UWI4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA2Q6UWI4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA2Q6UWI4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 AL162430.1-201ENST00000480705 870 ntBASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 AC092171.4-201ENST00000609130 632 ntBASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.23■□□□□ 0.51
SHISA2Q6UWI4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA2Q6UWI4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
SHISA2Q6UWI4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA2Q6UWI4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA2Q6UWI4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.22■□□□□ 0.51
SHISA2Q6UWI4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms