Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.46■□□□□ 0.55
RAB5BP61020 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB5BP61020 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB5BP61020 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB5BP61020 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB5BP61020 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB5BP61020 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB5BP61020 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.46■□□□□ 0.54
RAB5BP61020 AC092667.1-201ENST00000434301 2586 ntBASIC18.45■□□□□ 0.54
RAB5BP61020 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB5BP61020 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB5BP61020 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB5BP61020 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB5BP61020 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB5BP61020 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB5BP61020 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RAB5BP61020 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.45■□□□□ 0.54
RAB5BP61020 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB5BP61020 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RAB5BP61020 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RAB5BP61020 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.44■□□□□ 0.54
RAB5BP61020 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB5BP61020 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB5BP61020 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RAB5BP61020 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB5BP61020 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB5BP61020 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB5BP61020 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RAB5BP61020 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RAB5BP61020 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RAB5BP61020 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RAB5BP61020 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RAB5BP61020 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.42■□□□□ 0.54
RAB5BP61020 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RAB5BP61020 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RAB5BP61020 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.42■□□□□ 0.54
RAB5BP61020 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB5BP61020 DUSP8P3-201ENST00000399571 1760 ntBASIC18.42■□□□□ 0.54
RAB5BP61020 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RAB5BP61020 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB5BP61020 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RAB5BP61020 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RAB5BP61020 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB5BP61020 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB5BP61020 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB5BP61020 AC018358.1-201ENST00000631079 1402 ntBASIC18.4■□□□□ 0.54
RAB5BP61020 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RAB5BP61020 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB5BP61020 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB5BP61020 FOXO3B-201ENST00000395675 1928 ntBASIC18.39■□□□□ 0.53
RAB5BP61020 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5BP61020 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5BP61020 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5BP61020 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RAB5BP61020 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB5BP61020 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5BP61020 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5BP61020 LINC00526-201ENST00000581067 1875 ntBASIC18.39■□□□□ 0.53
RAB5BP61020 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5BP61020 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB5BP61020 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAB5BP61020 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB5BP61020 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5BP61020 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB5BP61020 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB5BP61020 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RAB5BP61020 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5BP61020 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB5BP61020 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB5BP61020 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB5BP61020 AL137060.1-201ENST00000618151 2648 ntBASIC18.37■□□□□ 0.53
RAB5BP61020 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms