Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.69■■□□□ 1.22
CLDN6P56747 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN6P56747 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN6P56747 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN6P56747 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN6P56747 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.69■■□□□ 1.22
CLDN6P56747 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLDN6P56747 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLDN6P56747 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.68■■□□□ 1.22
CLDN6P56747 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CLDN6P56747 AC106739.1-201ENST00000617035 715 ntBASIC22.68■■□□□ 1.22
CLDN6P56747 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLDN6P56747 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN6P56747 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN6P56747 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CLDN6P56747 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CLDN6P56747 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.67■■□□□ 1.22
CLDN6P56747 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN6P56747 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN6P56747 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLDN6P56747 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CLDN6P56747 UNC93B3-201ENST00000308076 687 ntBASIC22.66■■□□□ 1.22
CLDN6P56747 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN6P56747 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.66■■□□□ 1.22
CLDN6P56747 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.66■■□□□ 1.22
CLDN6P56747 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN6P56747 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.66■■□□□ 1.22
CLDN6P56747 AC026271.2-201ENST00000428091 497 ntBASIC22.66■■□□□ 1.22
CLDN6P56747 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN6P56747 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLDN6P56747 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.65■■□□□ 1.22
CLDN6P56747 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.65■■□□□ 1.22
CLDN6P56747 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.65■■□□□ 1.22
CLDN6P56747 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN6P56747 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLDN6P56747 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLDN6P56747 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.64■■□□□ 1.21
CLDN6P56747 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.64■■□□□ 1.21
CLDN6P56747 AL031432.3-201ENST00000607698 485 ntBASIC22.64■■□□□ 1.21
CLDN6P56747 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.64■■□□□ 1.21
CLDN6P56747 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CLDN6P56747 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.64■■□□□ 1.21
CLDN6P56747 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CLDN6P56747 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.63■■□□□ 1.21
CLDN6P56747 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.63■■□□□ 1.21
CLDN6P56747 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN6P56747 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.63■■□□□ 1.21
CLDN6P56747 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN6P56747 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLDN6P56747 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CLDN6P56747 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN6P56747 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLDN6P56747 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CLDN6P56747 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.62■■□□□ 1.21
CLDN6P56747 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.62■■□□□ 1.21
CLDN6P56747 AL136162.1-201ENST00000607711 1078 ntBASIC22.62■■□□□ 1.21
CLDN6P56747 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN6P56747 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN6P56747 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CLDN6P56747 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.61■■□□□ 1.21
CLDN6P56747 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLDN6P56747 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLDN6P56747 AC135279.3-201ENST00000610945 1311 ntBASIC22.6■■□□□ 1.21
CLDN6P56747 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.6■■□□□ 1.21
CLDN6P56747 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.6■■□□□ 1.21
CLDN6P56747 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.6■■□□□ 1.21
CLDN6P56747 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
CLDN6P56747 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.59■■□□□ 1.21
CLDN6P56747 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
CLDN6P56747 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN6P56747 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN6P56747 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN6P56747 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN6P56747 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLDN6P56747 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CLDN6P56747 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.59■■□□□ 1.21
CLDN6P56747 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CLDN6P56747 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN6P56747 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN6P56747 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.58■■□□□ 1.21
CLDN6P56747 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN6P56747 SUDS3P1-201ENST00000505831 966 ntBASIC22.58■■□□□ 1.21
CLDN6P56747 SNX5-217ENST00000606557 1087 ntBASIC22.58■■□□□ 1.21
CLDN6P56747 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CLDN6P56747 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLDN6P56747 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLDN6P56747 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN6P56747 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN6P56747 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN6P56747 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN6P56747 FOXO3B-201ENST00000395675 1928 ntBASIC22.57■■□□□ 1.2
CLDN6P56747 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLDN6P56747 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLDN6P56747 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN6P56747 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.56■■□□□ 1.2
CLDN6P56747 AC024257.2-201ENST00000549699 147 ntBASIC22.56■■□□□ 1.2
CLDN6P56747 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.56■■□□□ 1.2
CLDN6P56747 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN6P56747 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.56■■□□□ 1.2
CLDN6P56747 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms