Protein–RNA interactions for Protein: P34741

SDC2, Syndecan-2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2P34741 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.73■□□□□ 0.91
SDC2P34741 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SDC2P34741 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDC2P34741 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SDC2P34741 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SDC2P34741 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.73■□□□□ 0.91
SDC2P34741 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SDC2P34741 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
SDC2P34741 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SDC2P34741 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SDC2P34741 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.72■□□□□ 0.91
SDC2P34741 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SDC2P34741 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SDC2P34741 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.71■□□□□ 0.91
SDC2P34741 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.71■□□□□ 0.91
SDC2P34741 MIR3665-201ENST00000578708 105 ntBASIC20.71■□□□□ 0.91
SDC2P34741 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDC2P34741 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SDC2P34741 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SDC2P34741 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SDC2P34741 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SDC2P34741 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SDC2P34741 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SDC2P34741 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.69■□□□□ 0.9
SDC2P34741 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.69■□□□□ 0.9
SDC2P34741 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
SDC2P34741 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
SDC2P34741 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDC2P34741 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SDC2P34741 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SDC2P34741 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SDC2P34741 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SDC2P34741 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SDC2P34741 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.68■□□□□ 0.9
SDC2P34741 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDC2P34741 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SDC2P34741 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.68■□□□□ 0.9
SDC2P34741 AL117328.2-201ENST00000624617 1940 ntBASIC20.68■□□□□ 0.9
SDC2P34741 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SDC2P34741 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.68■□□□□ 0.9
SDC2P34741 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDC2P34741 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SDC2P34741 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SDC2P34741 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDC2P34741 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDC2P34741 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDC2P34741 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDC2P34741 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.67■□□□□ 0.9
SDC2P34741 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SDC2P34741 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.66■□□□□ 0.9
SDC2P34741 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SDC2P34741 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.66■□□□□ 0.9
SDC2P34741 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SDC2P34741 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.66■□□□□ 0.9
SDC2P34741 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.65■□□□□ 0.9
SDC2P34741 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDC2P34741 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDC2P34741 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDC2P34741 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDC2P34741 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDC2P34741 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDC2P34741 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDC2P34741 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SDC2P34741 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SDC2P34741 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SDC2P34741 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SDC2P34741 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SDC2P34741 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
SDC2P34741 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SDC2P34741 PKD1P6-201ENST00000343738 4769 ntBASIC20.64■□□□□ 0.89
SDC2P34741 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SDC2P34741 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.64■□□□□ 0.89
SDC2P34741 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.64■□□□□ 0.89
SDC2P34741 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SDC2P34741 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.63■□□□□ 0.89
SDC2P34741 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.63■□□□□ 0.89
SDC2P34741 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDC2P34741 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SDC2P34741 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SDC2P34741 AL359258.2-201ENST00000564063 1566 ntBASIC20.63■□□□□ 0.89
SDC2P34741 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDC2P34741 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDC2P34741 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.62■□□□□ 0.89
SDC2P34741 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.62■□□□□ 0.89
SDC2P34741 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SDC2P34741 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDC2P34741 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.62■□□□□ 0.89
SDC2P34741 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.62■□□□□ 0.89
SDC2P34741 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.62■□□□□ 0.89
SDC2P34741 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SDC2P34741 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.62■□□□□ 0.89
SDC2P34741 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDC2P34741 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.62■□□□□ 0.89
SDC2P34741 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDC2P34741 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDC2P34741 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SDC2P34741 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDC2P34741 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
SDC2P34741 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SDC2P34741 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms