Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1AP19438 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1AP19438 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1AP19438 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TNFRSF1AP19438 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TNFRSF1AP19438 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1AP19438 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.86■□□□□ 0.77
TNFRSF1AP19438 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TNFRSF1AP19438 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.86■□□□□ 0.77
TNFRSF1AP19438 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.86■□□□□ 0.77
TNFRSF1AP19438 AL451085.2-201ENST00000605085 799 ntBASIC19.86■□□□□ 0.77
TNFRSF1AP19438 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF1AP19438 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TNFRSF1AP19438 SLC6A10P-202ENST00000431994 2058 ntBASIC19.85■□□□□ 0.77
TNFRSF1AP19438 AC090877.2-201ENST00000558441 1738 ntBASIC19.85■□□□□ 0.77
TNFRSF1AP19438 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1AP19438 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1AP19438 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.85■□□□□ 0.77
TNFRSF1AP19438 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.85■□□□□ 0.77
TNFRSF1AP19438 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TNFRSF1AP19438 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TNFRSF1AP19438 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF1AP19438 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.85■□□□□ 0.77
TNFRSF1AP19438 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1AP19438 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1AP19438 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1AP19438 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1AP19438 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TNFRSF1AP19438 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFRSF1AP19438 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.84■□□□□ 0.77
TNFRSF1AP19438 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
TNFRSF1AP19438 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF1AP19438 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TNFRSF1AP19438 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.83■□□□□ 0.77
TNFRSF1AP19438 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TNFRSF1AP19438 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1AP19438 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1AP19438 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.82■□□□□ 0.76
TNFRSF1AP19438 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.82■□□□□ 0.76
TNFRSF1AP19438 AC009299.2-201ENST00000482477 511 ntBASIC19.82■□□□□ 0.76
TNFRSF1AP19438 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TNFRSF1AP19438 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TNFRSF1AP19438 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 BX664725.1-201ENST00000438252 379 ntBASIC19.81■□□□□ 0.76
TNFRSF1AP19438 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 AL035685.1-201ENST00000636663 812 ntBASIC19.81■□□□□ 0.76
TNFRSF1AP19438 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TNFRSF1AP19438 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1AP19438 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1AP19438 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1AP19438 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFRSF1AP19438 Z92544.1-202ENST00000571933 1220 ntBASIC19.8■□□□□ 0.76
TNFRSF1AP19438 MIR4281-201ENST00000580852 62 ntBASIC19.8■□□□□ 0.76
TNFRSF1AP19438 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TNFRSF1AP19438 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFRSF1AP19438 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFRSF1AP19438 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFRSF1AP19438 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1AP19438 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF1AP19438 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TNFRSF1AP19438 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF1AP19438 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.78■□□□□ 0.76
TNFRSF1AP19438 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TNFRSF1AP19438 KRT125P-201ENST00000546827 989 ntBASIC19.78■□□□□ 0.76
TNFRSF1AP19438 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.78■□□□□ 0.76
TNFRSF1AP19438 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.77■□□□□ 0.76
TNFRSF1AP19438 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TNFRSF1AP19438 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TNFRSF1AP19438 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TNFRSF1AP19438 AC137630.3-201ENST00000607245 391 ntBASIC19.77■□□□□ 0.76
TNFRSF1AP19438 MIR6089-201ENST00000616698 64 ntBASIC19.77■□□□□ 0.76
TNFRSF1AP19438 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1AP19438 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1AP19438 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFRSF1AP19438 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TNFRSF1AP19438 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1AP19438 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
TNFRSF1AP19438 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1AP19438 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1AP19438 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TNFRSF1AP19438 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFRSF1AP19438 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFRSF1AP19438 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms