Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RETP07949 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETP07949 AC135279.3-201ENST00000610945 1311 ntBASIC23.75■■□□□ 1.39
RETP07949 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
RETP07949 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RETP07949 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RETP07949 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RETP07949 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETP07949 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETP07949 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RETP07949 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETP07949 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETP07949 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RETP07949 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETP07949 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETP07949 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.73■■□□□ 1.39
RETP07949 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.73■■□□□ 1.39
RETP07949 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.73■■□□□ 1.39
RETP07949 AC135731.1-201ENST00000569415 2548 ntBASIC23.73■■□□□ 1.39
RETP07949 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.73■■□□□ 1.39
RETP07949 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RETP07949 AL449106.1-201ENST00000608517 1980 ntBASIC23.72■■□□□ 1.39
RETP07949 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETP07949 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.72■■□□□ 1.39
RETP07949 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.72■■□□□ 1.39
RETP07949 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RETP07949 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RETP07949 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RETP07949 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETP07949 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETP07949 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETP07949 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RETP07949 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RETP07949 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.71■■□□□ 1.39
RETP07949 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETP07949 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.71■■□□□ 1.39
RETP07949 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RETP07949 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.71■■□□□ 1.39
RETP07949 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RETP07949 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.71■■□□□ 1.39
RETP07949 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.71■■□□□ 1.39
RETP07949 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.71■■□□□ 1.39
RETP07949 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RETP07949 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RETP07949 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RETP07949 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RETP07949 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.7■■□□□ 1.38
RETP07949 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RETP07949 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RETP07949 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RETP07949 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.69■■□□□ 1.38
RETP07949 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.69■■□□□ 1.38
RETP07949 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
RETP07949 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.69■■□□□ 1.38
RETP07949 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.69■■□□□ 1.38
RETP07949 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.69■■□□□ 1.38
RETP07949 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RETP07949 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETP07949 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETP07949 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.68■■□□□ 1.38
RETP07949 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETP07949 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.68■■□□□ 1.38
RETP07949 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RETP07949 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETP07949 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.67■■□□□ 1.38
RETP07949 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETP07949 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.67■■□□□ 1.38
RETP07949 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETP07949 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RETP07949 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RETP07949 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RETP07949 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RETP07949 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.66■■□□□ 1.38
RETP07949 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RETP07949 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.66■■□□□ 1.38
RETP07949 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RETP07949 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.66■■□□□ 1.38
RETP07949 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.66■■□□□ 1.38
RETP07949 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.66■■□□□ 1.38
RETP07949 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
RETP07949 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETP07949 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETP07949 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RETP07949 SUDS3P1-201ENST00000505831 966 ntBASIC23.65■■□□□ 1.38
RETP07949 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.65■■□□□ 1.38
RETP07949 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
RETP07949 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
RETP07949 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
RETP07949 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RETP07949 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.64■■□□□ 1.37
RETP07949 AC011551.1-201ENST00000614101 683 ntBASIC23.64■■□□□ 1.37
RETP07949 AC091060.1-201ENST00000623524 1766 ntBASIC23.64■■□□□ 1.37
RETP07949 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RETP07949 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RETP07949 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RETP07949 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
RETP07949 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETP07949 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RETP07949 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RETP07949 AL031432.3-201ENST00000607698 485 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms