Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.43■■□□□ 1.82
PGK1P00558 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.43■■□□□ 1.82
PGK1P00558 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.43■■□□□ 1.82
PGK1P00558 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.43■■□□□ 1.82
PGK1P00558 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.43■■□□□ 1.82
PGK1P00558 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.43■■□□□ 1.82
PGK1P00558 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.43■■□□□ 1.82
PGK1P00558 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PGK1P00558 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PGK1P00558 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
PGK1P00558 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PGK1P00558 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PGK1P00558 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.41■■□□□ 1.82
PGK1P00558 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PGK1P00558 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
PGK1P00558 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PGK1P00558 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PGK1P00558 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
PGK1P00558 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PGK1P00558 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PGK1P00558 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PGK1P00558 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PGK1P00558 AC142381.2-201ENST00000566120 298 ntBASIC26.39■■□□□ 1.82
PGK1P00558 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.39■■□□□ 1.82
PGK1P00558 SNX5-217ENST00000606557 1087 ntBASIC26.39■■□□□ 1.82
PGK1P00558 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PGK1P00558 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
PGK1P00558 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.38■■□□□ 1.81
PGK1P00558 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.38■■□□□ 1.81
PGK1P00558 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.38■■□□□ 1.81
PGK1P00558 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.38■■□□□ 1.81
PGK1P00558 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PGK1P00558 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PGK1P00558 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
PGK1P00558 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PGK1P00558 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.37■■□□□ 1.81
PGK1P00558 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.37■■□□□ 1.81
PGK1P00558 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PGK1P00558 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.36■■□□□ 1.81
PGK1P00558 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PGK1P00558 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PGK1P00558 UNC93B3-201ENST00000308076 687 ntBASIC26.36■■□□□ 1.81
PGK1P00558 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
PGK1P00558 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PGK1P00558 RARRES2P6-201ENST00000567333 442 ntBASIC26.36■■□□□ 1.81
PGK1P00558 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PGK1P00558 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PGK1P00558 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
PGK1P00558 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.35■■□□□ 1.81
PGK1P00558 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.35■■□□□ 1.81
PGK1P00558 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PGK1P00558 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.35■■□□□ 1.81
PGK1P00558 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PGK1P00558 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PGK1P00558 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PGK1P00558 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PGK1P00558 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.34■■□□□ 1.81
PGK1P00558 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.34■■□□□ 1.81
PGK1P00558 MIR6722-201ENST00000617286 78 ntBASIC26.34■■□□□ 1.81
PGK1P00558 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.34■■□□□ 1.81
PGK1P00558 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PGK1P00558 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PGK1P00558 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PGK1P00558 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
PGK1P00558 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.33■■□□□ 1.81
PGK1P00558 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PGK1P00558 AL031432.3-201ENST00000607698 485 ntBASIC26.33■■□□□ 1.81
PGK1P00558 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
PGK1P00558 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.33■■□□□ 1.81
PGK1P00558 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PGK1P00558 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PGK1P00558 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PGK1P00558 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.32■■□□□ 1.8
PGK1P00558 AL136162.1-201ENST00000607711 1078 ntBASIC26.32■■□□□ 1.8
PGK1P00558 AC092666.2-201ENST00000613287 246 ntBASIC26.32■■□□□ 1.8
PGK1P00558 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PGK1P00558 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PGK1P00558 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.31■■□□□ 1.8
PGK1P00558 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.31■■□□□ 1.8
PGK1P00558 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.31■■□□□ 1.8
PGK1P00558 AC090877.2-201ENST00000558441 1738 ntBASIC26.31■■□□□ 1.8
PGK1P00558 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.3■■□□□ 1.8
PGK1P00558 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PGK1P00558 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PGK1P00558 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PGK1P00558 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PGK1P00558 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.3■■□□□ 1.8
PGK1P00558 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.3■■□□□ 1.8
PGK1P00558 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.3■■□□□ 1.8
PGK1P00558 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
PGK1P00558 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PGK1P00558 SUDS3P1-201ENST00000505831 966 ntBASIC26.29■■□□□ 1.8
PGK1P00558 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PGK1P00558 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PGK1P00558 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.28■■□□□ 1.8
PGK1P00558 AC142086.6-201ENST00000621154 1765 ntBASIC26.28■■□□□ 1.8
PGK1P00558 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PGK1P00558 AC026271.2-201ENST00000428091 497 ntBASIC26.27■■□□□ 1.8
PGK1P00558 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.27■■□□□ 1.8
PGK1P00558 AC135279.3-201ENST00000610945 1311 ntBASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms