Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 AL359504.2-201ENST00000605506 1601 ntBASIC16.97■□□□□ 0.31
TNFRSF6BO95407 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 MIR3665-201ENST00000578708 105 ntBASIC16.97■□□□□ 0.31
TNFRSF6BO95407 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNFRSF6BO95407 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF6BO95407 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNFRSF6BO95407 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.96■□□□□ 0.31
TNFRSF6BO95407 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TNFRSF6BO95407 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TNFRSF6BO95407 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFRSF6BO95407 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF6BO95407 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF6BO95407 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF6BO95407 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF6BO95407 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.95■□□□□ 0.3
TNFRSF6BO95407 AL117328.2-201ENST00000624617 1940 ntBASIC16.95■□□□□ 0.3
TNFRSF6BO95407 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF6BO95407 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF6BO95407 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TNFRSF6BO95407 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TNFRSF6BO95407 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFRSF6BO95407 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFRSF6BO95407 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF6BO95407 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF6BO95407 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF6BO95407 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TNFRSF6BO95407 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFRSF6BO95407 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF6BO95407 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFRSF6BO95407 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF6BO95407 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF6BO95407 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFRSF6BO95407 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFRSF6BO95407 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF6BO95407 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF6BO95407 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF6BO95407 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNFRSF6BO95407 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.91■□□□□ 0.3
TNFRSF6BO95407 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TNFRSF6BO95407 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TNFRSF6BO95407 AL359258.2-201ENST00000564063 1566 ntBASIC16.89■□□□□ 0.3
TNFRSF6BO95407 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.89■□□□□ 0.3
TNFRSF6BO95407 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 PKD1P6-201ENST00000343738 4769 ntBASIC16.89■□□□□ 0.29
TNFRSF6BO95407 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.89■□□□□ 0.29
TNFRSF6BO95407 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFRSF6BO95407 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms