Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.89■□□□□ 0.93
CCL21O00585 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.89■□□□□ 0.93
CCL21O00585 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCL21O00585 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCL21O00585 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCL21O00585 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCL21O00585 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCL21O00585 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCL21O00585 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.88■□□□□ 0.93
CCL21O00585 ZNRF2P3-201ENST00000424200 374 ntBASIC20.88■□□□□ 0.93
CCL21O00585 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.88■□□□□ 0.93
CCL21O00585 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCL21O00585 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCL21O00585 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCL21O00585 UNC93B3-201ENST00000308076 687 ntBASIC20.87■□□□□ 0.93
CCL21O00585 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.87■□□□□ 0.93
CCL21O00585 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.87■□□□□ 0.93
CCL21O00585 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCL21O00585 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCL21O00585 MIR6722-201ENST00000617286 78 ntBASIC20.87■□□□□ 0.93
CCL21O00585 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.87■□□□□ 0.93
CCL21O00585 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL21O00585 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCL21O00585 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
CCL21O00585 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCL21O00585 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL21O00585 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.86■□□□□ 0.93
CCL21O00585 SNX5-217ENST00000606557 1087 ntBASIC20.86■□□□□ 0.93
CCL21O00585 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL21O00585 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCL21O00585 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCL21O00585 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCL21O00585 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCL21O00585 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCL21O00585 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCL21O00585 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCL21O00585 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCL21O00585 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.85■□□□□ 0.93
CCL21O00585 RARRES2P6-201ENST00000567333 442 ntBASIC20.85■□□□□ 0.93
CCL21O00585 AL136162.1-201ENST00000607711 1078 ntBASIC20.85■□□□□ 0.93
CCL21O00585 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCL21O00585 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCL21O00585 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 AC092666.2-201ENST00000613287 246 ntBASIC20.84■□□□□ 0.93
CCL21O00585 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.84■□□□□ 0.93
CCL21O00585 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCL21O00585 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.83■□□□□ 0.93
CCL21O00585 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.83■□□□□ 0.93
CCL21O00585 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.83■□□□□ 0.93
CCL21O00585 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CCL21O00585 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCL21O00585 AC090877.2-201ENST00000558441 1738 ntBASIC20.82■□□□□ 0.92
CCL21O00585 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCL21O00585 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCL21O00585 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCL21O00585 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCL21O00585 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCL21O00585 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCL21O00585 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCL21O00585 SRD5A1P1-201ENST00000442297 786 ntBASIC20.82■□□□□ 0.92
CCL21O00585 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCL21O00585 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.82■□□□□ 0.92
CCL21O00585 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.82■□□□□ 0.92
CCL21O00585 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.82■□□□□ 0.92
CCL21O00585 AC135279.3-201ENST00000610945 1311 ntBASIC20.81■□□□□ 0.92
CCL21O00585 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCL21O00585 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCL21O00585 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCL21O00585 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.81■□□□□ 0.92
CCL21O00585 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCL21O00585 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL21O00585 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.8■□□□□ 0.92
CCL21O00585 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.8■□□□□ 0.92
CCL21O00585 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCL21O00585 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL21O00585 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.79■□□□□ 0.92
CCL21O00585 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL21O00585 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.79■□□□□ 0.92
CCL21O00585 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.79■□□□□ 0.92
CCL21O00585 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.79■□□□□ 0.92
CCL21O00585 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL21O00585 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL21O00585 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL21O00585 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCL21O00585 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL21O00585 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCL21O00585 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL21O00585 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL21O00585 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
CCL21O00585 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.78■□□□□ 0.92
CCL21O00585 SUDS3P1-201ENST00000505831 966 ntBASIC20.78■□□□□ 0.92
CCL21O00585 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.78■□□□□ 0.92
CCL21O00585 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms