Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF223E7ERA6 RARRES2P6-201ENST00000567333 442 ntBASIC19.61■□□□□ 0.73
RNF223E7ERA6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF223E7ERA6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF223E7ERA6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF223E7ERA6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.6■□□□□ 0.73
RNF223E7ERA6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF223E7ERA6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF223E7ERA6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF223E7ERA6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF223E7ERA6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF223E7ERA6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF223E7ERA6 UNC93B3-201ENST00000308076 687 ntBASIC19.59■□□□□ 0.73
RNF223E7ERA6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF223E7ERA6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.59■□□□□ 0.73
RNF223E7ERA6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF223E7ERA6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF223E7ERA6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF223E7ERA6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
RNF223E7ERA6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF223E7ERA6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF223E7ERA6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF223E7ERA6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF223E7ERA6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF223E7ERA6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF223E7ERA6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF223E7ERA6 FOXO3B-201ENST00000395675 1928 ntBASIC19.57■□□□□ 0.72
RNF223E7ERA6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF223E7ERA6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF223E7ERA6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF223E7ERA6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF223E7ERA6 AL136162.1-201ENST00000607711 1078 ntBASIC19.57■□□□□ 0.72
RNF223E7ERA6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF223E7ERA6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF223E7ERA6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF223E7ERA6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF223E7ERA6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF223E7ERA6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF223E7ERA6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF223E7ERA6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF223E7ERA6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF223E7ERA6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF223E7ERA6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF223E7ERA6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF223E7ERA6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF223E7ERA6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF223E7ERA6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF223E7ERA6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF223E7ERA6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF223E7ERA6 SNX5-217ENST00000606557 1087 ntBASIC19.55■□□□□ 0.72
RNF223E7ERA6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF223E7ERA6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF223E7ERA6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF223E7ERA6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF223E7ERA6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF223E7ERA6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF223E7ERA6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF223E7ERA6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF223E7ERA6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF223E7ERA6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF223E7ERA6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF223E7ERA6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF223E7ERA6 AC135279.3-201ENST00000610945 1311 ntBASIC19.53■□□□□ 0.72
RNF223E7ERA6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF223E7ERA6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF223E7ERA6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF223E7ERA6 MIR6722-201ENST00000617286 78 ntBASIC19.53■□□□□ 0.72
RNF223E7ERA6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF223E7ERA6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF223E7ERA6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF223E7ERA6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF223E7ERA6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF223E7ERA6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF223E7ERA6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF223E7ERA6 SRD5A1P1-201ENST00000442297 786 ntBASIC19.52■□□□□ 0.72
RNF223E7ERA6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF223E7ERA6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.52■□□□□ 0.71
RNF223E7ERA6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF223E7ERA6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF223E7ERA6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF223E7ERA6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF223E7ERA6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF223E7ERA6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF223E7ERA6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF223E7ERA6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF223E7ERA6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF223E7ERA6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF223E7ERA6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF223E7ERA6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF223E7ERA6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RNF223E7ERA6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF223E7ERA6 AC026271.2-201ENST00000428091 497 ntBASIC19.5■□□□□ 0.71
RNF223E7ERA6 SUDS3P1-201ENST00000505831 966 ntBASIC19.5■□□□□ 0.71
RNF223E7ERA6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF223E7ERA6 AL031432.3-201ENST00000607698 485 ntBASIC19.5■□□□□ 0.71
RNF223E7ERA6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RNF223E7ERA6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF223E7ERA6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF223E7ERA6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF223E7ERA6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms