Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 HLA-V-202ENST00000446817 847 ntBASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV18A0A075B6X5 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV18A0A075B6X5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV18A0A075B6X5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV18A0A075B6X5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV18A0A075B6X5 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV18A0A075B6X5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV18A0A075B6X5 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV18A0A075B6X5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.09■□□□□ 0.81
TRAV18A0A075B6X5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV18A0A075B6X5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV18A0A075B6X5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV18A0A075B6X5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV18A0A075B6X5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAV18A0A075B6X5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV18A0A075B6X5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.08■□□□□ 0.8
TRAV18A0A075B6X5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV18A0A075B6X5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV18A0A075B6X5 C9orf163-202ENST00000624034 2573 ntBASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV18A0A075B6X5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV18A0A075B6X5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV18A0A075B6X5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAV18A0A075B6X5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV18A0A075B6X5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV18A0A075B6X5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV18A0A075B6X5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRAV18A0A075B6X5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV18A0A075B6X5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV18A0A075B6X5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV18A0A075B6X5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRAV18A0A075B6X5 MIR6089-201ENST00000616698 64 ntBASIC20.02■□□□□ 0.8
TRAV18A0A075B6X5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRAV18A0A075B6X5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV18A0A075B6X5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV18A0A075B6X5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.02■□□□□ 0.79
TRAV18A0A075B6X5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TRAV18A0A075B6X5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 AC126177.7-201ENST00000547904 679 ntBASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV18A0A075B6X5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV18A0A075B6X5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms