Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGB1Q9Y5G3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.5■■□□□ 1.83
PCDHGB1Q9Y5G3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGB1Q9Y5G3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGB1Q9Y5G3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHGB1Q9Y5G3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.44■■□□□ 1.82
PCDHGB1Q9Y5G3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGB1Q9Y5G3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGB1Q9Y5G3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
PCDHGB1Q9Y5G3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGB1Q9Y5G3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGB1Q9Y5G3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
PCDHGB1Q9Y5G3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGB1Q9Y5G3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGB1Q9Y5G3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHGB1Q9Y5G3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGB1Q9Y5G3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHGB1Q9Y5G3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
PCDHGB1Q9Y5G3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGB1Q9Y5G3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PCDHGB1Q9Y5G3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
PCDHGB1Q9Y5G3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PCDHGB1Q9Y5G3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGB1Q9Y5G3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PCDHGB1Q9Y5G3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
PCDHGB1Q9Y5G3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.2■■□□□ 1.78
PCDHGB1Q9Y5G3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGB1Q9Y5G3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDHGB1Q9Y5G3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGB1Q9Y5G3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGB1Q9Y5G3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.14■■□□□ 1.77
PCDHGB1Q9Y5G3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHGB1Q9Y5G3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGB1Q9Y5G3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
PCDHGB1Q9Y5G3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGB1Q9Y5G3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGB1Q9Y5G3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGB1Q9Y5G3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
PCDHGB1Q9Y5G3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHGB1Q9Y5G3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGB1Q9Y5G3 AC145285.7-201ENST00000614819 1539 ntBASIC26.05■■□□□ 1.76
PCDHGB1Q9Y5G3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGB1Q9Y5G3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGB1Q9Y5G3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.01■■□□□ 1.75
PCDHGB1Q9Y5G3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHGB1Q9Y5G3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGB1Q9Y5G3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGB1Q9Y5G3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHGB1Q9Y5G3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGB1Q9Y5G3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGB1Q9Y5G3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGB1Q9Y5G3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGB1Q9Y5G3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHGB1Q9Y5G3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
PCDHGB1Q9Y5G3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGB1Q9Y5G3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGB1Q9Y5G3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGB1Q9Y5G3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGB1Q9Y5G3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGB1Q9Y5G3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGB1Q9Y5G3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGB1Q9Y5G3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGB1Q9Y5G3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGB1Q9Y5G3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGB1Q9Y5G3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGB1Q9Y5G3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGB1Q9Y5G3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGB1Q9Y5G3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
PCDHGB1Q9Y5G3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHGB1Q9Y5G3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHGB1Q9Y5G3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGB1Q9Y5G3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGB1Q9Y5G3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGB1Q9Y5G3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB1Q9Y5G3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB1Q9Y5G3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGB1Q9Y5G3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGB1Q9Y5G3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGB1Q9Y5G3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGB1Q9Y5G3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHGB1Q9Y5G3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGB1Q9Y5G3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHGB1Q9Y5G3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB1Q9Y5G3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB1Q9Y5G3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB1Q9Y5G3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGB1Q9Y5G3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGB1Q9Y5G3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGB1Q9Y5G3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGB1Q9Y5G3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGB1Q9Y5G3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDHGB1Q9Y5G3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGB1Q9Y5G3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGB1Q9Y5G3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.5■■□□□ 1.67
PCDHGB1Q9Y5G3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGB1Q9Y5G3 AL161658.1-201ENST00000623641 1967 ntBASIC25.48■■□□□ 1.67
PCDHGB1Q9Y5G3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGB1Q9Y5G3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
PCDHGB1Q9Y5G3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHGB1Q9Y5G3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms