Protein–RNA interactions for Protein: Q9NQX0

PRDM6, Putative histone-lysine N-methyltransferase PRDM6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6Q9NQX0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.75■■■□□ 2.67
PRDM6Q9NQX0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.71■■■□□ 2.67
PRDM6Q9NQX0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PRDM6Q9NQX0 AC097358.2-201ENST00000607541 1159 ntBASIC31.65■■■□□ 2.66
PRDM6Q9NQX0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PRDM6Q9NQX0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PRDM6Q9NQX0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
PRDM6Q9NQX0 SUZ12P1-203ENST00000578195 985 ntBASIC31.53■■■□□ 2.64
PRDM6Q9NQX0 AC136428.2-201ENST00000563187 214 ntBASIC31.51■■■□□ 2.63
PRDM6Q9NQX0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PRDM6Q9NQX0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
PRDM6Q9NQX0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.43■■■□□ 2.62
PRDM6Q9NQX0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
PRDM6Q9NQX0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PRDM6Q9NQX0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PRDM6Q9NQX0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.37■■■□□ 2.61
PRDM6Q9NQX0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRDM6Q9NQX0 SETD8P1-201ENST00000623146 1180 ntBASIC31.34■■■□□ 2.61
PRDM6Q9NQX0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRDM6Q9NQX0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.29■■■□□ 2.6
PRDM6Q9NQX0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PRDM6Q9NQX0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PRDM6Q9NQX0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
PRDM6Q9NQX0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.25■■■□□ 2.59
PRDM6Q9NQX0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PRDM6Q9NQX0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PRDM6Q9NQX0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.15■■■□□ 2.58
PRDM6Q9NQX0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
PRDM6Q9NQX0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.13■■■□□ 2.57
PRDM6Q9NQX0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
PRDM6Q9NQX0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
PRDM6Q9NQX0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.09■■■□□ 2.57
PRDM6Q9NQX0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.07■■■□□ 2.56
PRDM6Q9NQX0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PRDM6Q9NQX0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PRDM6Q9NQX0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.06■■■□□ 2.56
PRDM6Q9NQX0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
PRDM6Q9NQX0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.05■■■□□ 2.56
PRDM6Q9NQX0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PRDM6Q9NQX0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
PRDM6Q9NQX0 AL162393.1-201ENST00000437852 946 ntBASIC31.02■■■□□ 2.56
PRDM6Q9NQX0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PRDM6Q9NQX0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.01■■■□□ 2.55
PRDM6Q9NQX0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
PRDM6Q9NQX0 MIR7108-201ENST00000614319 87 ntBASIC31■■■□□ 2.55
PRDM6Q9NQX0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.95■■■□□ 2.55
PRDM6Q9NQX0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PRDM6Q9NQX0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PRDM6Q9NQX0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.93■■■□□ 2.54
PRDM6Q9NQX0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
PRDM6Q9NQX0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.91■■■□□ 2.54
PRDM6Q9NQX0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.86■■■□□ 2.53
PRDM6Q9NQX0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PRDM6Q9NQX0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PRDM6Q9NQX0 HLA-V-202ENST00000446817 847 ntBASIC30.83■■■□□ 2.53
PRDM6Q9NQX0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.83■■■□□ 2.53
PRDM6Q9NQX0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PRDM6Q9NQX0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.81■■■□□ 2.52
PRDM6Q9NQX0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.81■■■□□ 2.52
PRDM6Q9NQX0 ABHD17AP4-201ENST00000411545 909 ntBASIC30.81■■■□□ 2.52
PRDM6Q9NQX0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.79■■■□□ 2.52
PRDM6Q9NQX0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PRDM6Q9NQX0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.76■■■□□ 2.51
PRDM6Q9NQX0 CAHM-201ENST00000604200 896 ntBASIC30.76■■■□□ 2.51
PRDM6Q9NQX0 AP006261.1-201ENST00000584783 668 ntBASIC30.71■■■□□ 2.51
PRDM6Q9NQX0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PRDM6Q9NQX0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.67■■■□□ 2.5
PRDM6Q9NQX0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PRDM6Q9NQX0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PRDM6Q9NQX0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.66■■■□□ 2.5
PRDM6Q9NQX0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.66■■■□□ 2.5
PRDM6Q9NQX0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PRDM6Q9NQX0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
PRDM6Q9NQX0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PRDM6Q9NQX0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PRDM6Q9NQX0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PRDM6Q9NQX0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
PRDM6Q9NQX0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PRDM6Q9NQX0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PRDM6Q9NQX0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PRDM6Q9NQX0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.53■■■□□ 2.48
PRDM6Q9NQX0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PRDM6Q9NQX0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PRDM6Q9NQX0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.49■■■□□ 2.47
PRDM6Q9NQX0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.49■■■□□ 2.47
PRDM6Q9NQX0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.46■■■□□ 2.47
PRDM6Q9NQX0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.46■■■□□ 2.47
PRDM6Q9NQX0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PRDM6Q9NQX0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PRDM6Q9NQX0 AL391121.1-201ENST00000607967 1349 ntBASIC30.45■■■□□ 2.46
PRDM6Q9NQX0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.43■■■□□ 2.46
PRDM6Q9NQX0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
PRDM6Q9NQX0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.42■■■□□ 2.46
PRDM6Q9NQX0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.42■■■□□ 2.46
PRDM6Q9NQX0 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.4■■■□□ 2.46
PRDM6Q9NQX0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
PRDM6Q9NQX0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
PRDM6Q9NQX0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.33■■■□□ 2.45
PRDM6Q9NQX0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.33■■■□□ 2.45
PRDM6Q9NQX0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms