Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
KCNMB3Q9NPA1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
KCNMB3Q9NPA1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.72■■■□□ 2.83
KCNMB3Q9NPA1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
KCNMB3Q9NPA1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
KCNMB3Q9NPA1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
KCNMB3Q9NPA1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
KCNMB3Q9NPA1 AP002365.1-201ENST00000603448 772 ntBASIC32.57■■■□□ 2.8
KCNMB3Q9NPA1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.53■■■□□ 2.8
KCNMB3Q9NPA1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
KCNMB3Q9NPA1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
KCNMB3Q9NPA1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
KCNMB3Q9NPA1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.51■■■□□ 2.79
KCNMB3Q9NPA1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
KCNMB3Q9NPA1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.46■■■□□ 2.79
KCNMB3Q9NPA1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
KCNMB3Q9NPA1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
KCNMB3Q9NPA1 DYNLL1-208ENST00000550178 581 ntBASIC32.45■■■□□ 2.79
KCNMB3Q9NPA1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.45■■■□□ 2.79
KCNMB3Q9NPA1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
KCNMB3Q9NPA1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.44■■■□□ 2.78
KCNMB3Q9NPA1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.44■■■□□ 2.78
KCNMB3Q9NPA1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
KCNMB3Q9NPA1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.42■■■□□ 2.78
KCNMB3Q9NPA1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
KCNMB3Q9NPA1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KCNMB3Q9NPA1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
KCNMB3Q9NPA1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KCNMB3Q9NPA1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KCNMB3Q9NPA1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.34■■■□□ 2.77
KCNMB3Q9NPA1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.33■■■□□ 2.77
KCNMB3Q9NPA1 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
KCNMB3Q9NPA1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.32■■■□□ 2.76
KCNMB3Q9NPA1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.32■■■□□ 2.76
KCNMB3Q9NPA1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
KCNMB3Q9NPA1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNMB3Q9NPA1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNMB3Q9NPA1 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
KCNMB3Q9NPA1 AL031258.1-201ENST00000623562 325 ntBASIC32.26■■■□□ 2.75
KCNMB3Q9NPA1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.21■■■□□ 2.75
KCNMB3Q9NPA1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
KCNMB3Q9NPA1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.18■■■□□ 2.74
KCNMB3Q9NPA1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
KCNMB3Q9NPA1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.13■■■□□ 2.73
KCNMB3Q9NPA1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
KCNMB3Q9NPA1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
KCNMB3Q9NPA1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.09■■■□□ 2.73
KCNMB3Q9NPA1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
KCNMB3Q9NPA1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
KCNMB3Q9NPA1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
KCNMB3Q9NPA1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
KCNMB3Q9NPA1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
KCNMB3Q9NPA1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.03■■■□□ 2.72
KCNMB3Q9NPA1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
KCNMB3Q9NPA1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC32.02■■■□□ 2.72
KCNMB3Q9NPA1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
KCNMB3Q9NPA1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
KCNMB3Q9NPA1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32■■■□□ 2.71
KCNMB3Q9NPA1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
KCNMB3Q9NPA1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.95■■■□□ 2.7
KCNMB3Q9NPA1 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.93■■■□□ 2.7
KCNMB3Q9NPA1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
KCNMB3Q9NPA1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
KCNMB3Q9NPA1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.9■■■□□ 2.7
KCNMB3Q9NPA1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.89■■■□□ 2.69
KCNMB3Q9NPA1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
KCNMB3Q9NPA1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
KCNMB3Q9NPA1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.85■■■□□ 2.69
KCNMB3Q9NPA1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.85■■■□□ 2.69
KCNMB3Q9NPA1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
KCNMB3Q9NPA1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
KCNMB3Q9NPA1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.8■■■□□ 2.68
KCNMB3Q9NPA1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
KCNMB3Q9NPA1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
KCNMB3Q9NPA1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.78■■■□□ 2.68
KCNMB3Q9NPA1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNMB3Q9NPA1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
KCNMB3Q9NPA1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.74■■■□□ 2.67
KCNMB3Q9NPA1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.73■■■□□ 2.67
KCNMB3Q9NPA1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
KCNMB3Q9NPA1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
KCNMB3Q9NPA1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNMB3Q9NPA1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNMB3Q9NPA1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.72■■■□□ 2.67
KCNMB3Q9NPA1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
KCNMB3Q9NPA1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
KCNMB3Q9NPA1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
KCNMB3Q9NPA1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
KCNMB3Q9NPA1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.63■■■□□ 2.65
KCNMB3Q9NPA1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
KCNMB3Q9NPA1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.62■■■□□ 2.65
KCNMB3Q9NPA1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
KCNMB3Q9NPA1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.57■■■□□ 2.64
KCNMB3Q9NPA1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.55■■■□□ 2.64
KCNMB3Q9NPA1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
KCNMB3Q9NPA1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
KCNMB3Q9NPA1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.53■■■□□ 2.64
KCNMB3Q9NPA1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
KCNMB3Q9NPA1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
KCNMB3Q9NPA1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms