Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD8Q9HCK8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.6■■■□□ 2.17
CHD8Q9HCK8 AC097358.2-201ENST00000607541 1159 ntBASIC28.58■■■□□ 2.17
CHD8Q9HCK8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHD8Q9HCK8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CHD8Q9HCK8 AL031258.1-201ENST00000623562 325 ntBASIC28.48■■■□□ 2.15
CHD8Q9HCK8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CHD8Q9HCK8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHD8Q9HCK8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.43■■■□□ 2.14
CHD8Q9HCK8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.43■■■□□ 2.14
CHD8Q9HCK8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHD8Q9HCK8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
CHD8Q9HCK8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.4■■■□□ 2.14
CHD8Q9HCK8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
CHD8Q9HCK8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.39■■■□□ 2.13
CHD8Q9HCK8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD8Q9HCK8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHD8Q9HCK8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD8Q9HCK8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD8Q9HCK8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.27■■■□□ 2.12
CHD8Q9HCK8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD8Q9HCK8 AL162393.1-201ENST00000437852 946 ntBASIC28.26■■■□□ 2.11
CHD8Q9HCK8 SETD8P1-201ENST00000623146 1180 ntBASIC28.25■■■□□ 2.11
CHD8Q9HCK8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD8Q9HCK8 HLA-V-202ENST00000446817 847 ntBASIC28.25■■■□□ 2.11
CHD8Q9HCK8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CHD8Q9HCK8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CHD8Q9HCK8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD8Q9HCK8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.2■■■□□ 2.1
CHD8Q9HCK8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CHD8Q9HCK8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD8Q9HCK8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHD8Q9HCK8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.17■■■□□ 2.1
CHD8Q9HCK8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHD8Q9HCK8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.12■■■□□ 2.09
CHD8Q9HCK8 MIR7108-201ENST00000614319 87 ntBASIC28.12■■■□□ 2.09
CHD8Q9HCK8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD8Q9HCK8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.1■■■□□ 2.09
CHD8Q9HCK8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.06■■■□□ 2.08
CHD8Q9HCK8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.04■■■□□ 2.08
CHD8Q9HCK8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
CHD8Q9HCK8 AP006261.1-201ENST00000584783 668 ntBASIC28.02■■■□□ 2.08
CHD8Q9HCK8 ABHD17AP4-201ENST00000411545 909 ntBASIC28■■■□□ 2.07
CHD8Q9HCK8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.99■■■□□ 2.07
CHD8Q9HCK8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD8Q9HCK8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD8Q9HCK8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD8Q9HCK8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.97■■■□□ 2.07
CHD8Q9HCK8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CHD8Q9HCK8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD8Q9HCK8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD8Q9HCK8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.9■■■□□ 2.06
CHD8Q9HCK8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.9■■■□□ 2.06
CHD8Q9HCK8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
CHD8Q9HCK8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CHD8Q9HCK8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.84■■■□□ 2.05
CHD8Q9HCK8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.82■■■□□ 2.04
CHD8Q9HCK8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHD8Q9HCK8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CHD8Q9HCK8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.76■■■□□ 2.03
CHD8Q9HCK8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CHD8Q9HCK8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHD8Q9HCK8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHD8Q9HCK8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
CHD8Q9HCK8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.72■■■□□ 2.03
CHD8Q9HCK8 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.71■■■□□ 2.03
CHD8Q9HCK8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CHD8Q9HCK8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.71■■■□□ 2.03
CHD8Q9HCK8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.71■■■□□ 2.03
CHD8Q9HCK8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
CHD8Q9HCK8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.69■■■□□ 2.02
CHD8Q9HCK8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CHD8Q9HCK8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CHD8Q9HCK8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHD8Q9HCK8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHD8Q9HCK8 CAHM-201ENST00000604200 896 ntBASIC27.65■■■□□ 2.02
CHD8Q9HCK8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.64■■■□□ 2.01
CHD8Q9HCK8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.62■■■□□ 2.01
CHD8Q9HCK8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD8Q9HCK8 AL391121.1-201ENST00000607967 1349 ntBASIC27.61■■■□□ 2.01
CHD8Q9HCK8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD8Q9HCK8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.57■■■□□ 2
CHD8Q9HCK8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.56■■■□□ 2
CHD8Q9HCK8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.55■■■□□ 2
CHD8Q9HCK8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD8Q9HCK8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD8Q9HCK8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHD8Q9HCK8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
CHD8Q9HCK8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD8Q9HCK8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.51■■□□□ 1.99
CHD8Q9HCK8 MIR3665-201ENST00000578708 105 ntBASIC27.51■■□□□ 1.99
CHD8Q9HCK8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHD8Q9HCK8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.46■■□□□ 1.99
CHD8Q9HCK8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.46■■□□□ 1.99
CHD8Q9HCK8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.46■■□□□ 1.99
CHD8Q9HCK8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.45■■□□□ 1.98
CHD8Q9HCK8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.44■■□□□ 1.98
CHD8Q9HCK8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD8Q9HCK8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD8Q9HCK8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms