Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC38.69■■■■□ 3.78
PCDH11YQ9BZA8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC38.69■■■■□ 3.78
PCDH11YQ9BZA8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC38.69■■■■□ 3.78
PCDH11YQ9BZA8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
PCDH11YQ9BZA8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC38.66■■■■□ 3.78
PCDH11YQ9BZA8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
PCDH11YQ9BZA8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.78
PCDH11YQ9BZA8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC38.59■■■■□ 3.77
PCDH11YQ9BZA8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC38.58■■■■□ 3.77
PCDH11YQ9BZA8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC38.55■■■■□ 3.76
PCDH11YQ9BZA8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC38.54■■■■□ 3.76
PCDH11YQ9BZA8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
PCDH11YQ9BZA8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC38.47■■■■□ 3.75
PCDH11YQ9BZA8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC38.41■■■■□ 3.74
PCDH11YQ9BZA8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC38.39■■■■□ 3.74
PCDH11YQ9BZA8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC38.39■■■■□ 3.74
PCDH11YQ9BZA8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
PCDH11YQ9BZA8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
PCDH11YQ9BZA8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
PCDH11YQ9BZA8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC38.34■■■■□ 3.73
PCDH11YQ9BZA8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC38.33■■■■□ 3.73
PCDH11YQ9BZA8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC38.31■■■■□ 3.72
PCDH11YQ9BZA8 RARRES2P7-201ENST00000567349 469 ntBASIC38.31■■■■□ 3.72
PCDH11YQ9BZA8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC38.26■■■■□ 3.72
PCDH11YQ9BZA8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC38.25■■■■□ 3.71
PCDH11YQ9BZA8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC38.22■■■■□ 3.71
PCDH11YQ9BZA8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC38.21■■■■□ 3.71
PCDH11YQ9BZA8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC38.19■■■■□ 3.7
PCDH11YQ9BZA8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
PCDH11YQ9BZA8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC38.14■■■■□ 3.7
PCDH11YQ9BZA8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC38.13■■■■□ 3.7
PCDH11YQ9BZA8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC38.13■■■■□ 3.7
PCDH11YQ9BZA8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
PCDH11YQ9BZA8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC38.09■■■■□ 3.69
PCDH11YQ9BZA8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC38.09■■■■□ 3.69
PCDH11YQ9BZA8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC38.08■■■■□ 3.69
PCDH11YQ9BZA8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC38.06■■■■□ 3.68
PCDH11YQ9BZA8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC38.04■■■■□ 3.68
PCDH11YQ9BZA8 AC097358.2-201ENST00000607541 1159 ntBASIC38■■■■□ 3.67
PCDH11YQ9BZA8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
PCDH11YQ9BZA8 AC136428.2-201ENST00000563187 214 ntBASIC37.97■■■■□ 3.67
PCDH11YQ9BZA8 SETD8P1-201ENST00000623146 1180 ntBASIC37.96■■■■□ 3.67
PCDH11YQ9BZA8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC37.92■■■■□ 3.66
PCDH11YQ9BZA8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
PCDH11YQ9BZA8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC37.89■■■■□ 3.66
PCDH11YQ9BZA8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
PCDH11YQ9BZA8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC37.87■■■■□ 3.65
PCDH11YQ9BZA8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
PCDH11YQ9BZA8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.65
PCDH11YQ9BZA8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC37.81■■■■□ 3.64
PCDH11YQ9BZA8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC37.81■■■■□ 3.64
PCDH11YQ9BZA8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
PCDH11YQ9BZA8 SUZ12P1-203ENST00000578195 985 ntBASIC37.78■■■■□ 3.64
PCDH11YQ9BZA8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
PCDH11YQ9BZA8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC37.71■■■■□ 3.63
PCDH11YQ9BZA8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
PCDH11YQ9BZA8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC37.71■■■■□ 3.63
PCDH11YQ9BZA8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC37.68■■■■□ 3.62
PCDH11YQ9BZA8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
PCDH11YQ9BZA8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
PCDH11YQ9BZA8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC37.66■■■■□ 3.62
PCDH11YQ9BZA8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
PCDH11YQ9BZA8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC37.64■■■■□ 3.62
PCDH11YQ9BZA8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
PCDH11YQ9BZA8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC37.61■■■■□ 3.61
PCDH11YQ9BZA8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC37.61■■■■□ 3.61
PCDH11YQ9BZA8 MVK-208ENST00000539696 608 ntTSL 5 BASIC37.58■■■■□ 3.61
PCDH11YQ9BZA8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
PCDH11YQ9BZA8 AC145285.7-201ENST00000614819 1539 ntBASIC37.55■■■■□ 3.6
PCDH11YQ9BZA8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC37.54■■■■□ 3.6
PCDH11YQ9BZA8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
PCDH11YQ9BZA8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC37.52■■■■□ 3.6
PCDH11YQ9BZA8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
PCDH11YQ9BZA8 RPS2P35-201ENST00000443417 897 ntBASIC37.48■■■■□ 3.59
PCDH11YQ9BZA8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC37.47■■■■□ 3.59
PCDH11YQ9BZA8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC37.44■■■■□ 3.58
PCDH11YQ9BZA8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC37.38■■■■□ 3.58
PCDH11YQ9BZA8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
PCDH11YQ9BZA8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
PCDH11YQ9BZA8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
PCDH11YQ9BZA8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
PCDH11YQ9BZA8 CAHM-201ENST00000604200 896 ntBASIC37.33■■■■□ 3.57
PCDH11YQ9BZA8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC37.32■■■■□ 3.56
PCDH11YQ9BZA8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
PCDH11YQ9BZA8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
PCDH11YQ9BZA8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
PCDH11YQ9BZA8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
PCDH11YQ9BZA8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC37.21■■■■□ 3.55
PCDH11YQ9BZA8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
PCDH11YQ9BZA8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
PCDH11YQ9BZA8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
PCDH11YQ9BZA8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC37.19■■■■□ 3.54
PCDH11YQ9BZA8 AL391121.1-201ENST00000607967 1349 ntBASIC37.18■■■■□ 3.54
PCDH11YQ9BZA8 AL133380.1-201ENST00000506013 324 ntBASIC37.16■■■■□ 3.54
PCDH11YQ9BZA8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
PCDH11YQ9BZA8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC37.14■■■■□ 3.54
PCDH11YQ9BZA8 AL162393.1-201ENST00000437852 946 ntBASIC37.13■■■■□ 3.54
PCDH11YQ9BZA8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC37.12■■■■□ 3.53
PCDH11YQ9BZA8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
PCDH11YQ9BZA8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC37.11■■■■□ 3.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms