Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TM2D3Q9BRN9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.32■■□□□ 1
TM2D3Q9BRN9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.32■■□□□ 1
TM2D3Q9BRN9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.32■■□□□ 1
TM2D3Q9BRN9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TM2D3Q9BRN9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TM2D3Q9BRN9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TM2D3Q9BRN9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.29■■□□□ 1
TM2D3Q9BRN9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.29■■□□□ 1
TM2D3Q9BRN9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.29■■□□□ 1
TM2D3Q9BRN9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM2D3Q9BRN9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM2D3Q9BRN9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.18■□□□□ 0.98
TM2D3Q9BRN9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TM2D3Q9BRN9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.17■□□□□ 0.98
TM2D3Q9BRN9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.17■□□□□ 0.98
TM2D3Q9BRN9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TM2D3Q9BRN9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TM2D3Q9BRN9 RARRES2P7-201ENST00000567349 469 ntBASIC21.15■□□□□ 0.98
TM2D3Q9BRN9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.14■□□□□ 0.97
TM2D3Q9BRN9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.13■□□□□ 0.97
TM2D3Q9BRN9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM2D3Q9BRN9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM2D3Q9BRN9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.09■□□□□ 0.97
TM2D3Q9BRN9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM2D3Q9BRN9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TM2D3Q9BRN9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.05■□□□□ 0.96
TM2D3Q9BRN9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM2D3Q9BRN9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.04■□□□□ 0.96
TM2D3Q9BRN9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.04■□□□□ 0.96
TM2D3Q9BRN9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.04■□□□□ 0.96
TM2D3Q9BRN9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.03■□□□□ 0.96
TM2D3Q9BRN9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM2D3Q9BRN9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM2D3Q9BRN9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.01■□□□□ 0.95
TM2D3Q9BRN9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM2D3Q9BRN9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21■□□□□ 0.95
TM2D3Q9BRN9 AC097358.2-201ENST00000607541 1159 ntBASIC20.98■□□□□ 0.95
TM2D3Q9BRN9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM2D3Q9BRN9 SETD8P1-201ENST00000623146 1180 ntBASIC20.94■□□□□ 0.94
TM2D3Q9BRN9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.93■□□□□ 0.94
TM2D3Q9BRN9 AC136428.2-201ENST00000563187 214 ntBASIC20.92■□□□□ 0.94
TM2D3Q9BRN9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TM2D3Q9BRN9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.91■□□□□ 0.94
TM2D3Q9BRN9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM2D3Q9BRN9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM2D3Q9BRN9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TM2D3Q9BRN9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.86■□□□□ 0.93
TM2D3Q9BRN9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.85■□□□□ 0.93
TM2D3Q9BRN9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TM2D3Q9BRN9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.83■□□□□ 0.93
TM2D3Q9BRN9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TM2D3Q9BRN9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TM2D3Q9BRN9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TM2D3Q9BRN9 SUZ12P1-203ENST00000578195 985 ntBASIC20.82■□□□□ 0.92
TM2D3Q9BRN9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.79■□□□□ 0.92
TM2D3Q9BRN9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM2D3Q9BRN9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TM2D3Q9BRN9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM2D3Q9BRN9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.76■□□□□ 0.91
TM2D3Q9BRN9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM2D3Q9BRN9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.75■□□□□ 0.91
TM2D3Q9BRN9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM2D3Q9BRN9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.75■□□□□ 0.91
TM2D3Q9BRN9 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.73■□□□□ 0.91
TM2D3Q9BRN9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.73■□□□□ 0.91
TM2D3Q9BRN9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TM2D3Q9BRN9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM2D3Q9BRN9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.72■□□□□ 0.91
TM2D3Q9BRN9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TM2D3Q9BRN9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM2D3Q9BRN9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM2D3Q9BRN9 RPS2P35-201ENST00000443417 897 ntBASIC20.69■□□□□ 0.9
TM2D3Q9BRN9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM2D3Q9BRN9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TM2D3Q9BRN9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TM2D3Q9BRN9 AC145285.7-201ENST00000614819 1539 ntBASIC20.64■□□□□ 0.9
TM2D3Q9BRN9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TM2D3Q9BRN9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TM2D3Q9BRN9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM2D3Q9BRN9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TM2D3Q9BRN9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TM2D3Q9BRN9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TM2D3Q9BRN9 CAHM-201ENST00000604200 896 ntBASIC20.57■□□□□ 0.88
TM2D3Q9BRN9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.55■□□□□ 0.88
TM2D3Q9BRN9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TM2D3Q9BRN9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TM2D3Q9BRN9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM2D3Q9BRN9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM2D3Q9BRN9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM2D3Q9BRN9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.52■□□□□ 0.88
TM2D3Q9BRN9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.52■□□□□ 0.88
TM2D3Q9BRN9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM2D3Q9BRN9 AL391121.1-201ENST00000607967 1349 ntBASIC20.5■□□□□ 0.87
TM2D3Q9BRN9 AP006261.1-201ENST00000584783 668 ntBASIC20.49■□□□□ 0.87
TM2D3Q9BRN9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM2D3Q9BRN9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM2D3Q9BRN9 AL162393.1-201ENST00000437852 946 ntBASIC20.47■□□□□ 0.87
TM2D3Q9BRN9 AL133380.1-201ENST00000506013 324 ntBASIC20.47■□□□□ 0.87
TM2D3Q9BRN9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms