Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
DUX3Q96PT4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
DUX3Q96PT4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.41■■□□□ 1.18
DUX3Q96PT4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DUX3Q96PT4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DUX3Q96PT4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
DUX3Q96PT4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DUX3Q96PT4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DUX3Q96PT4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DUX3Q96PT4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DUX3Q96PT4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC22.31■■□□□ 1.16
DUX3Q96PT4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
DUX3Q96PT4 AL031258.1-201ENST00000623562 325 ntBASIC22.29■■□□□ 1.16
DUX3Q96PT4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
DUX3Q96PT4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DUX3Q96PT4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DUX3Q96PT4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.23■■□□□ 1.15
DUX3Q96PT4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DUX3Q96PT4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DUX3Q96PT4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
DUX3Q96PT4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DUX3Q96PT4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.17■■□□□ 1.14
DUX3Q96PT4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
DUX3Q96PT4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DUX3Q96PT4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.15■■□□□ 1.14
DUX3Q96PT4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.15■■□□□ 1.14
DUX3Q96PT4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DUX3Q96PT4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC22.11■■□□□ 1.13
DUX3Q96PT4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.11■■□□□ 1.13
DUX3Q96PT4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DUX3Q96PT4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.09■■□□□ 1.13
DUX3Q96PT4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
DUX3Q96PT4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
DUX3Q96PT4 AC145285.7-201ENST00000614819 1539 ntBASIC22.07■■□□□ 1.12
DUX3Q96PT4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DUX3Q96PT4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DUX3Q96PT4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DUX3Q96PT4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DUX3Q96PT4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DUX3Q96PT4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.01■■□□□ 1.11
DUX3Q96PT4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.01■■□□□ 1.11
DUX3Q96PT4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.99■■□□□ 1.11
DUX3Q96PT4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.98■■□□□ 1.11
DUX3Q96PT4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DUX3Q96PT4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.96■■□□□ 1.11
DUX3Q96PT4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
DUX3Q96PT4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
DUX3Q96PT4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
DUX3Q96PT4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DUX3Q96PT4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DUX3Q96PT4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.91■■□□□ 1.1
DUX3Q96PT4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DUX3Q96PT4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DUX3Q96PT4 RARRES2P7-201ENST00000567349 469 ntBASIC21.9■■□□□ 1.1
DUX3Q96PT4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DUX3Q96PT4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.89■■□□□ 1.1
DUX3Q96PT4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
DUX3Q96PT4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.87■■□□□ 1.09
DUX3Q96PT4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DUX3Q96PT4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
DUX3Q96PT4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
DUX3Q96PT4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
DUX3Q96PT4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.83■■□□□ 1.09
DUX3Q96PT4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
DUX3Q96PT4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
DUX3Q96PT4 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.8■■□□□ 1.08
DUX3Q96PT4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.8■■□□□ 1.08
DUX3Q96PT4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
DUX3Q96PT4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
DUX3Q96PT4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DUX3Q96PT4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.79■■□□□ 1.08
DUX3Q96PT4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DUX3Q96PT4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.77■■□□□ 1.08
DUX3Q96PT4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.77■■□□□ 1.07
DUX3Q96PT4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
DUX3Q96PT4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC21.76■■□□□ 1.07
DUX3Q96PT4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.76■■□□□ 1.07
DUX3Q96PT4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.75■■□□□ 1.07
DUX3Q96PT4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DUX3Q96PT4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.74■■□□□ 1.07
DUX3Q96PT4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DUX3Q96PT4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DUX3Q96PT4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DUX3Q96PT4 SETD8P1-201ENST00000623146 1180 ntBASIC21.72■■□□□ 1.07
DUX3Q96PT4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DUX3Q96PT4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.7■■□□□ 1.06
DUX3Q96PT4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.69■■□□□ 1.06
DUX3Q96PT4 AC097358.2-201ENST00000607541 1159 ntBASIC21.68■■□□□ 1.06
DUX3Q96PT4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.68■■□□□ 1.06
DUX3Q96PT4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DUX3Q96PT4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DUX3Q96PT4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DUX3Q96PT4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.65■■□□□ 1.06
DUX3Q96PT4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.64■■□□□ 1.05
DUX3Q96PT4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DUX3Q96PT4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DUX3Q96PT4 AC136428.2-201ENST00000563187 214 ntBASIC21.61■■□□□ 1.05
DUX3Q96PT4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DUX3Q96PT4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DUX3Q96PT4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms