Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.76■■■□□ 2.19
NAF1Q96HR8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
NAF1Q96HR8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
NAF1Q96HR8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
NAF1Q96HR8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
NAF1Q96HR8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.7■■■□□ 2.18
NAF1Q96HR8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
NAF1Q96HR8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.68■■■□□ 2.18
NAF1Q96HR8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.67■■■□□ 2.18
NAF1Q96HR8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
NAF1Q96HR8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
NAF1Q96HR8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
NAF1Q96HR8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NAF1Q96HR8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.61■■■□□ 2.17
NAF1Q96HR8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
NAF1Q96HR8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
NAF1Q96HR8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.52■■■□□ 2.16
NAF1Q96HR8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
NAF1Q96HR8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
NAF1Q96HR8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
NAF1Q96HR8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
NAF1Q96HR8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.42■■■□□ 2.14
NAF1Q96HR8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.42■■■□□ 2.14
NAF1Q96HR8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
NAF1Q96HR8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.4■■■□□ 2.14
NAF1Q96HR8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NAF1Q96HR8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NAF1Q96HR8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NAF1Q96HR8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.36■■■□□ 2.13
NAF1Q96HR8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
NAF1Q96HR8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
NAF1Q96HR8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NAF1Q96HR8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
NAF1Q96HR8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NAF1Q96HR8 DYNLL1-208ENST00000550178 581 ntBASIC28.3■■■□□ 2.12
NAF1Q96HR8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NAF1Q96HR8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NAF1Q96HR8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.27■■■□□ 2.12
NAF1Q96HR8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.26■■■□□ 2.12
NAF1Q96HR8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NAF1Q96HR8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NAF1Q96HR8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NAF1Q96HR8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
NAF1Q96HR8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.22■■■□□ 2.11
NAF1Q96HR8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.2■■■□□ 2.11
NAF1Q96HR8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.2■■■□□ 2.1
NAF1Q96HR8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.2■■■□□ 2.1
NAF1Q96HR8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.18■■■□□ 2.1
NAF1Q96HR8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
NAF1Q96HR8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NAF1Q96HR8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NAF1Q96HR8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.15■■■□□ 2.1
NAF1Q96HR8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
NAF1Q96HR8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.13■■■□□ 2.09
NAF1Q96HR8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
NAF1Q96HR8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.08■■■□□ 2.09
NAF1Q96HR8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NAF1Q96HR8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
NAF1Q96HR8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NAF1Q96HR8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.05■■■□□ 2.08
NAF1Q96HR8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NAF1Q96HR8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
NAF1Q96HR8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.04■■■□□ 2.08
NAF1Q96HR8 AL031258.1-201ENST00000623562 325 ntBASIC28.03■■■□□ 2.08
NAF1Q96HR8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
NAF1Q96HR8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
NAF1Q96HR8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
NAF1Q96HR8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28■■■□□ 2.07
NAF1Q96HR8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28■■■□□ 2.07
NAF1Q96HR8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
NAF1Q96HR8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.99■■■□□ 2.07
NAF1Q96HR8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
NAF1Q96HR8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.98■■■□□ 2.07
NAF1Q96HR8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
NAF1Q96HR8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
NAF1Q96HR8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
NAF1Q96HR8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
NAF1Q96HR8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.94■■■□□ 2.06
NAF1Q96HR8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
NAF1Q96HR8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.93■■■□□ 2.06
NAF1Q96HR8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.92■■■□□ 2.06
NAF1Q96HR8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.91■■■□□ 2.06
NAF1Q96HR8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
NAF1Q96HR8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.9■■■□□ 2.06
NAF1Q96HR8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
NAF1Q96HR8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.05
NAF1Q96HR8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.87■■■□□ 2.05
NAF1Q96HR8 RARRES2P7-201ENST00000567349 469 ntBASIC27.86■■■□□ 2.05
NAF1Q96HR8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.85■■■□□ 2.05
NAF1Q96HR8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
NAF1Q96HR8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NAF1Q96HR8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.82■■■□□ 2.04
NAF1Q96HR8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
NAF1Q96HR8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NAF1Q96HR8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
NAF1Q96HR8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
NAF1Q96HR8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
NAF1Q96HR8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NAF1Q96HR8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NAF1Q96HR8 AL161658.1-201ENST00000623641 1967 ntBASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms