Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
PSD4Q8NDX1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
PSD4Q8NDX1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PSD4Q8NDX1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.78■■□□□ 1.88
PSD4Q8NDX1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.78■■□□□ 1.88
PSD4Q8NDX1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PSD4Q8NDX1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PSD4Q8NDX1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
PSD4Q8NDX1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.74■■□□□ 1.87
PSD4Q8NDX1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PSD4Q8NDX1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PSD4Q8NDX1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
PSD4Q8NDX1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
PSD4Q8NDX1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PSD4Q8NDX1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PSD4Q8NDX1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PSD4Q8NDX1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.67■■□□□ 1.86
PSD4Q8NDX1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PSD4Q8NDX1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
PSD4Q8NDX1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
PSD4Q8NDX1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PSD4Q8NDX1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.61■■□□□ 1.85
PSD4Q8NDX1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PSD4Q8NDX1 DYNLL1-208ENST00000550178 581 ntBASIC26.61■■□□□ 1.85
PSD4Q8NDX1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
PSD4Q8NDX1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.6■■□□□ 1.85
PSD4Q8NDX1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.6■■□□□ 1.85
PSD4Q8NDX1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PSD4Q8NDX1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PSD4Q8NDX1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PSD4Q8NDX1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PSD4Q8NDX1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PSD4Q8NDX1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PSD4Q8NDX1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PSD4Q8NDX1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.45■■□□□ 1.82
PSD4Q8NDX1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PSD4Q8NDX1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
PSD4Q8NDX1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.42■■□□□ 1.82
PSD4Q8NDX1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PSD4Q8NDX1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
PSD4Q8NDX1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PSD4Q8NDX1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
PSD4Q8NDX1 AL031258.1-201ENST00000623562 325 ntBASIC26.41■■□□□ 1.82
PSD4Q8NDX1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.41■■□□□ 1.82
PSD4Q8NDX1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PSD4Q8NDX1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
PSD4Q8NDX1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PSD4Q8NDX1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PSD4Q8NDX1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
PSD4Q8NDX1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.37■■□□□ 1.81
PSD4Q8NDX1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PSD4Q8NDX1 AC145285.7-201ENST00000614819 1539 ntBASIC26.34■■□□□ 1.81
PSD4Q8NDX1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
PSD4Q8NDX1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PSD4Q8NDX1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PSD4Q8NDX1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PSD4Q8NDX1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
PSD4Q8NDX1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PSD4Q8NDX1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PSD4Q8NDX1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PSD4Q8NDX1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PSD4Q8NDX1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PSD4Q8NDX1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.24■■□□□ 1.79
PSD4Q8NDX1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
PSD4Q8NDX1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.23■■□□□ 1.79
PSD4Q8NDX1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.21■■□□□ 1.79
PSD4Q8NDX1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.21■■□□□ 1.79
PSD4Q8NDX1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PSD4Q8NDX1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.18■■□□□ 1.78
PSD4Q8NDX1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.17■■□□□ 1.78
PSD4Q8NDX1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.16■■□□□ 1.78
PSD4Q8NDX1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
PSD4Q8NDX1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PSD4Q8NDX1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PSD4Q8NDX1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.14■■□□□ 1.78
PSD4Q8NDX1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PSD4Q8NDX1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.11■■□□□ 1.77
PSD4Q8NDX1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PSD4Q8NDX1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PSD4Q8NDX1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.11■■□□□ 1.77
PSD4Q8NDX1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.09■■□□□ 1.77
PSD4Q8NDX1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PSD4Q8NDX1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PSD4Q8NDX1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.07■■□□□ 1.76
PSD4Q8NDX1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.07■■□□□ 1.76
PSD4Q8NDX1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.05■■□□□ 1.76
PSD4Q8NDX1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.05■■□□□ 1.76
PSD4Q8NDX1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.05■■□□□ 1.76
PSD4Q8NDX1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PSD4Q8NDX1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.02■■□□□ 1.76
PSD4Q8NDX1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PSD4Q8NDX1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PSD4Q8NDX1 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.98■■□□□ 1.75
PSD4Q8NDX1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PSD4Q8NDX1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PSD4Q8NDX1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
PSD4Q8NDX1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.93■■□□□ 1.74
PSD4Q8NDX1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PSD4Q8NDX1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PSD4Q8NDX1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms